RNA–Protein interactions for RNA: ENST00000439222.5

RAPH1-209, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAPH1, Length 1,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-209ENST00000439222 DMXL2Q8TDJ6 3036 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3DA0A087WVF3 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3IA0A087WXS9 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3EA0A087X179 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3KA0A087X1G2 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TMEM120BA0PK00 339 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CCDC78A2IDD5 438 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3FA6NER0 549 aaPredicted RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 MEI4A8MW99 385 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 A8MX80 341 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 FOXO6A8MYZ6 492 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3LB9A6J9 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TRAFD1O14545 582 aaPredicted RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 RAD51BO15315 384 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 UGT1A9O60656 530 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SHOX2O60902 331 aaPredicted RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 RNASEH1O60930 286 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 FAM155BO75949 473 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 KRT38O76015 456 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 BPNT1O95861 308 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 GSRP00390 522 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CFIP05156 583 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SNRPAP09012 282 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3HP0C7X1 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 ERVK-10P10266 1014 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 ADRB3P13945 408 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CREB1P16220 341 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CA4P22748 312 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 ITGB7P26010 798 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 GP5P40197 560 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 MDH1P40925 334 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CSNK1DP48730 415 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CSNK1EP49674 416 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SNRPD1P62314 119 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TRAF2Q12933 501 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 LAMB3Q13751 1172 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 GALNT3Q14435 633 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TERF2Q15554 542 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 PERM1Q5SV97 790 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TPRG1LQ5T0D9 272 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TSTD2Q5T7W7 516 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TEDDM1Q5T9Z0 273 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3GQ6DHY5 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 KIAA0930Q6ICG6 404 aaPredicted RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3CQ6IPX1 549 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 ESRP1Q6NXG1 681 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 PACS1Q6VY07 963 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SLC36A4Q6YBV0 504 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 ERN2Q76MJ5 926 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 NLRP9Q7RTR0 991 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SYT12Q8IV01 421 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TBC1D3Q8IZP1 549 aaPredicted RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 PELI3Q8N2H9 469 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TMIEQ8NEW7 156 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CADM4Q8NFZ8 388 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 DNASE2BQ8WZ79 361 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 PEX13Q92968 403 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 MTBPQ96DY7 904 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 LOXL4Q96JB6 756 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SMC6Q96SB8 1091 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SMAD5Q99717 465 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CPNE1Q99829 537 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CAPS2Q9BXY5 557 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TRABDQ9H4I3 376 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 FBRSQ9HAH7 460 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 UGT1A7Q9HAW7 530 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 UGT1A10Q9HAW8 530 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 UGT1A8Q9HAW9 530 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SSU72Q9NP77 194 aaKnown RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 C20orf96Q9NUD7 363 aaPredicted RBP5.53□□□□□ -1.52
RAPH1-209ENST00000439222 NSMCE4AQ9NXX6 385 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 IL1RAPL1Q9NZN1 696 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 TXNDC16Q9P2K2 825 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 SLC17A6Q9P2U8 582 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 CHKBQ9Y259 395 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 PCDHGC4Q9Y5F7 938 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 RAI2Q9Y5P3 530 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 PLXNB3Q9ULL4 1909 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 ZZEF1O43149 2961 aa5.53□□□□□ -1.52
RAPH1-209ENST00000439222 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.52□□□□□ -1.53
RAPH1-209ENST00000439222 A0A1B0GVT2 93 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 A0A1W2PPC4 97 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 A0A1W2PPM1 405 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 A0A1W2PQU0 124 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 MROH6A6NGR9 719 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 TRIM49D1C9J1S8 452 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 C1QTNF3-AMACRE9PGA6 284 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 AREL1O15033 823 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 PRPF4O43172 522 aaKnown RBP eCLIP5.52□□□□□ -1.53
RAPH1-209ENST00000439222 LATO43561 262 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 LDB2O43679 373 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 RNGTTO60942 597 aaKnown RBP5.52□□□□□ -1.53
RAPH1-209ENST00000439222 SOCS5O75159 536 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 KATNA1O75449 491 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 POP4O95707 220 aaKnown RBP5.52□□□□□ -1.53
RAPH1-209ENST00000439222 IGSF6O95976 241 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 PRLP01236 227 aa5.52□□□□□ -1.53
RAPH1-209ENST00000439222 MT-ND3P03897 115 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms