RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PER2O15055 1255 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 MOSPD3O75425 235 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 GFAPP14136 432 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 PTPN2P17706 415 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 ME2P23368 584 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 ZNF140P52738 457 aaPredicted RBP13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 FOXA1P55317 472 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 NME5P56597 212 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 TMED1Q13445 227 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 LAYNQ6UX15 382 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 GPR150Q8NGU9 434 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 GAB3Q8WWW8 586 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 L3HYPDHQ96EM0 354 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 C19orf60Q96EN9 201 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 ALG14Q96F25 216 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 CLEC4EQ9ULY5 219 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 MYOFQ9NZM1 2061 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 CDH23Q9H251 3354 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 MTHFD2P13995 350 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 PFKLP17858 780 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 SLC26A3P40879 764 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 NTHL1P78549 312 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 SQLEQ14534 574 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 NRF1Q16656 503 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 PAQR3Q6TCH7 311 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 CMTM8Q8IZV2 173 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 APCDD1Q8J025 514 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 EFHBQ8N7U6 833 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 HSPBAP1Q96EW2 488 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 LRGUKQ96M69 825 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 KCNA7Q96RP8 456 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 BPIFA1Q9NP55 256 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 MID1IP1Q9NPA3 183 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 RIMS3Q9UJD0 308 aa13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 FCF1Q9Y324 198 aaKnown RBP13.77□□□□□ -0.21
PTCHD3-201ENST00000438700 RANBP2P49792 3224 aaKnown RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 NCF1BA6NI72 391 aaPredicted RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 NCF1CA8MVU1 366 aaPredicted RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 FBP2O00757 339 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 SRP72O76094 671 aaKnown RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 PRLP01236 227 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 NCF1P14598 390 aaPredicted RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 OGNP20774 298 aaKnown RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 GALNT1Q10472 559 aaPredicted RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 RALGDSQ12967 914 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 MPPE1Q53F39 396 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 REP15Q6BDI9 236 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 DCAF4L2Q8NA75 395 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 PEX13Q92968 403 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 TRMOQ9BU70 441 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 NLE1Q9NVX2 485 aaPredicted RBP13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 CACNA2D2Q9NY47 1150 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 NDUFA13Q9P0J0 144 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 IKZF3Q9UKT9 509 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 PCDHGA7Q9Y5G6 932 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 DNAJC15Q9Y5T4 150 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 CEP290O15078 2479 aa13.76□□□□□ -0.21
PTCHD3-201ENST00000438700 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 SUPT3HB4E1H0 165 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 E7ENX8 843 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 GPR39O43194 453 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 SUPT3HO75486 399 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 CDK14O94921 469 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 FGF19O95750 216 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 RB1P06400 928 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 RPL10P27635 214 aaKnown RBP13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 ADARP55265 1226 aaKnown RBP13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 PSME3P61289 254 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 NFKB2Q00653 900 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 TYSND1Q2T9J0 566 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 TMEM259Q4ZIN3 620 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 ARHGAP15Q53QZ3 475 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 RBM23Q86U06 439 aaKnown RBP13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 TRPC4APQ8TEL6 797 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 KLHL32Q96NJ5 620 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 SLC39A3Q9BRY0 314 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 SEMA6AQ9H2E6 1030 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 GALPQ9UBC7 116 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 LHX3Q9UBR4 397 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 TDRKHQ9Y2W6 561 aaKnown RBP13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 MED16Q9Y2X0 877 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 C9JVG2 144 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 K7ERQ8 282 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 OR1I1O60431 355 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 NDUFS3O75489 264 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 ALDOCP09972 364 aaKnown RBP13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 SUOXP51687 545 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 RHOAP61586 193 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 LARP4Q71RC2 724 aaKnown RBP eCLIP13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 RTL10Q7L3V2 364 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 PIANPQ8IYJ0 282 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 LPGAT1Q92604 370 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 ATOH8Q96SQ7 321 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 GPR21Q99679 349 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms