RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 DNAJB4Q9UDY4 337 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 NAP1L2Q9ULW6 460 aaPredicted RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 PCDHAC2Q9Y5I4 1007 aa3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.7□□□□□ -1.82
LSM1P1-201ENST00000438629 A0A1W2PS18 150 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 OR2A25A4D2G3 310 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 TMEM8BA6NDV4 472 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 IKBKBO14920 756 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 ZBTB43O43298 467 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 AVILO75366 819 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 SNRNP70P08621 437 aaKnown RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 POLR2CP19387 275 aaPredicted RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 EIF2DP41214 584 aaKnown RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 AMPHP49418 695 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 ARSEP51690 589 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 PNLIPRP2P54317 469 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 CLDN20P56880 219 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 SLC20A2Q08357 652 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 TROAPQ12815 778 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 GAGE2BQ13066 116 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 MVPQ14764 893 aaKnown RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 MEP1AQ16819 746 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 GAGE2EQ4V326 116 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 KRTCAP3Q53RY4 240 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 KRT79Q5XKE5 535 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 FAM109BQ6ICB4 259 aaPredicted RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 GAGE2AQ6NT46 116 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 PRSS57Q6UWY2 283 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 PM20D2Q8IYS1 436 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 RASGEF1CQ8N431 466 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 METTL27Q8N6F8 245 aaPredicted RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 SMRP1Q8NCR6 262 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 OR5R1Q8NH85 324 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 SPATA22Q8NHS9 363 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 LMO3Q8TAP4 145 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 IL17FQ96PD4 163 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 KIFC3Q9BVG8 833 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 SLCO5A1Q9H2Y9 848 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 MRPL15Q9P015 296 aaKnown RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 RCC2Q9P258 522 aaKnown RBP3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 GAGE2DQ9UEU5 116 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 AMACRQ9UHK6 382 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 RPS6KA6Q9UK32 745 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 RABGAP1Q9Y3P9 1069 aa3.69□□□□□ -1.82
LSM1P1-201ENST00000438629 ASPDHA6ND91 283 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 SYNDIG1LA6NDD5 238 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ZNF587BE7ETH6 402 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 NDUFS4O43181 175 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ZNHIT1O43257 154 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 BEST1O76090 585 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 STARD3NLO95772 234 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 TPOP07202 933 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 FAM106CPP0CH98 169 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 SELLP14151 372 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 PLA2G2AP14555 144 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 KCNA5P22460 613 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 HRH2P25021 359 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ACSL1P33121 698 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ACTN2P35609 894 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 NNMTP40261 264 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 NRIP1P48552 1158 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 STAT2P52630 851 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 GAS1P54826 345 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 MLLT10P55197 1068 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 PLIN5Q00G26 463 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 CALD1Q05682 793 aaKnown RBP3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 COASYQ13057 564 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 KRT33BQ14525 404 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 GFRALQ6UXV0 394 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ASB18Q6ZVZ8 466 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ADGRA1Q86SQ6 560 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 SATL1Q86VE3 508 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 NAGSQ8N159 534 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ACVR1CQ8NER5 493 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 HMGCLL1Q8TB92 370 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 DUSP19Q8WTR2 217 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 SLC20A1Q8WUM9 679 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 TMEM255BQ8WV15 326 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 PRPF31Q8WWY3 499 aaKnown RBP3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 CEP295NLQ96MC4 621 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 NEUROD6Q96NK8 337 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 SMC6Q96SB8 1091 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 RTN4RQ9BZR6 473 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 LRMDAQ9H2I8 198 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 DNAJC18Q9H819 358 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 PAG1Q9NWQ8 432 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 WWOXQ9NZC7 414 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 MORF4L1Q9UBU8 362 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 NRBP1Q9UHY1 535 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 KCNS2Q9ULS6 477 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 PCDHGB4Q9UN71 923 aa3.68□□□□□ -1.82
LSM1P1-201ENST00000438629 ZCWPW2A0A1B0GU75 182 aa3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 SMTNL1A8MU46 457 aa3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 PAPSS1O43252 624 aaPredicted RBP3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 WDR1O75083 606 aa3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 ZNF217O75362 1048 aa3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 RSL1D1O76021 490 aaKnown RBP3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 KCNK5O95279 499 aa3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 MMP9P14780 707 aa3.67□□□□□ -1.82
LSM1P1-201ENST00000438629 MYOD1P15172 320 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms