RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 C1orf54Q8WWF1 131 aa12.22□□□□□ -0.45
EXT1-202ENST00000436216 LRRC45Q96CN5 670 aa12.22□□□□□ -0.45
EXT1-202ENST00000436216 LRRC40Q9H9A6 602 aa12.22□□□□□ -0.45
EXT1-202ENST00000436216 WASH6PQ9NQA3 447 aa12.22□□□□□ -0.45
EXT1-202ENST00000436216 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
EXT1-202ENST00000436216 ATXN7L1Q9ULK2 861 aaPredicted RBP12.22□□□□□ -0.45
EXT1-202ENST00000436216 DNMT3AQ9Y6K1 912 aaPredicted RBP12.22□□□□□ -0.45
EXT1-202ENST00000436216 ZNF106Q9H2Y7 1883 aaKnown RBP12.22□□□□□ -0.45
EXT1-202ENST00000436216 IGHV1OR21-1A0A087WYE8 117 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.45
EXT1-202ENST00000436216 CDRT15L2A8MXV6 281 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 GPR39O43194 453 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 SRP72O76094 671 aaKnown RBP12.21□□□□□ -0.45
EXT1-202ENST00000436216 SUN1O94901 812 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 PRAMEF1O95521 474 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 SLC2A4P14672 509 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 XRCC1P18887 633 aaPredicted RBP12.21□□□□□ -0.45
EXT1-202ENST00000436216 ALDH4A1P30038 563 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 UBE2IP63279 158 aaKnown RBP12.21□□□□□ -0.45
EXT1-202ENST00000436216 CFHR1Q03591 330 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 DMPKQ09013 629 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 NFATC2Q13469 925 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 C3orf38Q5JPI3 329 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 GPRC6AQ5T6X5 926 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 CRTC3Q6UUV7 619 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 PIM3Q86V86 326 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 RASGEF1AQ8N9B8 481 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 OR13C4Q8NGS5 318 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 FOXP3Q9BZS1 431 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 ZCCHC2Q9C0B9 1178 aaKnown RBP12.21□□□□□ -0.45
EXT1-202ENST00000436216 STRADBQ9C0K7 418 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 SYNDIG1Q9H7V2 258 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 PRDM8Q9NQV8 689 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 DRG1Q9Y295 367 aaKnown RBP12.21□□□□□ -0.45
EXT1-202ENST00000436216 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.45
EXT1-202ENST00000436216 NBEAQ8NFP9 2946 aa12.21□□□□□ -0.46
EXT1-202ENST00000436216 CHD6Q8TD26 2715 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 TRBV23OR9-2A0A075B6M9 112 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 PMS2P1A4D2B8 440 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 GOLGA6L3A6NEY3 463 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 H7C0S8 307 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 PLD2O14939 933 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 FDFT1P37268 417 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 HADHAP40939 763 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 CTSCP53634 463 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 GPLD1P80108 840 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 HHEXQ03014 270 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 SEMA5AQ13591 1074 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 INSCQ1MX18 579 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 AMZ1Q400G9 498 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 AGAP9Q5VTM2 703 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 USP53Q70EK8 1073 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 RAB11FIP2Q7L804 512 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 CLEC14AQ86T13 490 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 LINC00523Q86TU6 105 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 FBXO39Q8N4B4 442 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 AVL9Q8NBF6 648 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 GDAP1Q8TB36 358 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 MAIP1Q8WWC4 291 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 TMEM159Q96B96 161 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 SH3KBP1Q96B97 665 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 ZNF514Q96K75 400 aaPredicted RBP12.2□□□□□ -0.46
EXT1-202ENST00000436216 TTC25Q96NG3 672 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 NUDT22Q9BRQ3 303 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 SEMA6CQ9H3T2 930 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 ASB8Q9H765 288 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 UCK1Q9HA47 277 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 RDH14Q9HBH5 336 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 ETNK1Q9HBU6 452 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 THSD1Q9NS62 852 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 SCHIP1Q9P0W5 487 aaPredicted RBP12.2□□□□□ -0.46
EXT1-202ENST00000436216 PDP2Q9P2J9 529 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 CPNE7Q9UBL6 633 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 ZNF148Q9UQR1 794 aa12.2□□□□□ -0.46
EXT1-202ENST00000436216 ADAMTS20P59510 1910 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 TRBV5-4A0A0C4DH59 114 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 IGHV5-10-1A0A0J9YXX1 117 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 MROH6A6NGR9 719 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 SGTAO43765 313 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 SNX2O60749 519 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 POP7O75817 140 aaKnown RBP12.19□□□□□ -0.46
EXT1-202ENST00000436216 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
EXT1-202ENST00000436216 BRAFP15056 766 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 TPH1P17752 444 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
EXT1-202ENST00000436216 LIMK2P53671 638 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 EPHA4P54764 986 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 BIRC2Q13490 618 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 TRA2AQ13595 282 aaKnown RBP eCLIP12.19□□□□□ -0.46
EXT1-202ENST00000436216 SNX1Q13596 522 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 GTF2H3Q13889 308 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 GPR33Q49SQ1 333 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 NKAIN2Q5VXU1 208 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 TMEM71Q6P5X7 295 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 TMEM220Q6QAJ8 160 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 SLC9B2Q86UD5 537 aa12.19□□□□□ -0.46
EXT1-202ENST00000436216 TRAPPC5Q8IUR0 188 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms