RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 MCM9Q9NXL9 1143 aa4.49□□□□□ -1.69
HMGB1P45-201ENST00000435986 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P45-201ENST00000435986 GAGE2DQ9UEU5 116 aa4.49□□□□□ -1.69
HMGB1P45-201ENST00000435986 RASAL2Q9UJF2 1139 aa4.49□□□□□ -1.69
HMGB1P45-201ENST00000435986 TUBE1Q9UJT0 475 aa4.49□□□□□ -1.69
HMGB1P45-201ENST00000435986 ISY1Q9ULR0 285 aaKnown RBP4.49□□□□□ -1.69
HMGB1P45-201ENST00000435986 CLSPNQ9HAW4 1339 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 A0A1W2PR77 199 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 TMEM8BA6NDV4 472 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 CGB1A6NKQ9 187 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 TNFRSF13BO14836 293 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 RGS14O43566 566 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 PLRG1O43660 514 aaKnown RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 KCNJ13O60928 360 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 ZWINTO95229 277 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 BCL10O95999 233 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 PRSS2P07478 247 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 HOXC6P09630 235 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 PSG1P11464 419 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 UGT1A1P22309 533 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 TCEA1P23193 301 aaKnown RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 PCGF2P35227 344 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 TAS2R38P59533 333 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 RALGDSQ12967 914 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 GPS2Q13227 327 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 IL11RAQ14626 422 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 CALCRLQ16602 461 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 C11orf88Q6PI97 169 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 IL27RAQ6UWB1 636 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 CLEC17AQ6ZS10 378 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 ERN2Q76MJ5 926 aaKnown RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 AACSQ86V21 672 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 CHCHD4Q8N4Q1 142 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 PCDH20Q8N6Y1 951 aaKnown RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 TEKT4Q8WW24 435 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 MRPS27Q92552 414 aaKnown RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 URB1-AS1Q96HZ7 61 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 SEPHS2Q99611 448 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 FERMT1Q9BQL6 677 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 SLC25A23Q9BV35 468 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 NUP85Q9BW27 656 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 GRPEL1Q9HAV7 217 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 PCDH9Q9HC56 1237 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 ELOVL5Q9NYP7 299 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 SELENONQ9NZV5 590 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 SLC24A2Q9UI40 661 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 AGO1Q9UL18 857 aaKnown RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 KLHL20Q9Y2M5 609 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 WBP11Q9Y2W2 641 aaKnown RBP4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 SNX9Q9Y5X1 595 aa4.48□□□□□ -1.69
HMGB1P45-201ENST00000435986 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 A0A0U1RQJ8 604 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 NDUFS7O75251 213 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 MOSPD3O75425 235 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 PSMD10O75832 226 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 GLUD1P00367 558 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 LINGO3P0C6S8 592 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 GLUD2P49448 558 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 PPP2R2BQ00005 443 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 BFSP1Q12934 665 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 HSPB3Q12988 150 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 TRAF1Q13077 416 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 CAMK2DQ13557 499 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 HNF4GQ14541 408 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 NSUN5P2Q63ZY6 315 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 C8orf82Q6P1X6 216 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 WDR73Q6P4I2 378 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 PLPPR4Q7Z2D5 763 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 FJX1Q86VR8 437 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 TMEM173Q86WV6 379 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 GALNT13Q8IUC8 556 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 PM20D2Q8IYS1 436 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 BEST3Q8N1M1 668 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 FBXO39Q8N4B4 442 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 SLC5A8Q8N695 610 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 PAPD5Q8NDF8 572 aaKnown RBP4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 KIF18AQ8NI77 898 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 FAM216AQ8WUB2 273 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 RSPH1Q8WYR4 309 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 WASF1Q92558 559 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 FAM162AQ96A26 154 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 VMP1Q96GC9 406 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 MS4A10Q96PG2 267 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 MTERF1Q99551 399 aaKnown RBP4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 CITED2Q99967 270 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 HGH1Q9BTY7 390 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 SEBOXQ9HB31 216 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 ZBTB40Q9NUA8 1239 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 HAO2Q9NYQ3 351 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 WDR35Q9P2L0 1181 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 GTF3C4Q9UKN8 822 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 MYO6Q9UM54 1294 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 AMDHD2Q9Y303 409 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 GRIP1Q9Y3R0 1128 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 TMEM184BQ9Y519 407 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 PTGDR2Q9Y5Y4 395 aa4.47□□□□□ -1.69
HMGB1P45-201ENST00000435986 ZNF541Q9H0D2 1346 aa4.46□□□□□ -1.69
HMGB1P45-201ENST00000435986 TTC3P53804 2025 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms