RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 BRD8Q9H0E9 1235 aa15.47■□□□□ 0.07
CALD1-208ENST00000435928 MAGEE1Q9HCI5 957 aa15.47■□□□□ 0.07
CALD1-208ENST00000435928 POT1Q9NUX5 634 aa15.47■□□□□ 0.07
CALD1-208ENST00000435928 SLC23A2Q9UGH3 650 aa15.47■□□□□ 0.07
CALD1-208ENST00000435928 MRPS18BQ9Y676 258 aaKnown RBP15.47■□□□□ 0.07
CALD1-208ENST00000435928 ZNF487B1APH4 448 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 PPP1R12AO14974 1030 aaPredicted RBP15.46■□□□□ 0.07
CALD1-208ENST00000435928 CASP14P31944 242 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 DLSTP36957 453 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 CAPZBP47756 277 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 SEPHS1P49903 392 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 CDK18Q07002 472 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 MESDQ14696 234 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 PDK1Q15118 436 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 LACTB2Q53H82 288 aaPredicted RBP15.46■□□□□ 0.07
CALD1-208ENST00000435928 C6orf15Q6UXA7 325 aaPredicted RBP15.46■□□□□ 0.07
CALD1-208ENST00000435928 TMC3Q7Z5M5 1100 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 RNF31Q96EP0 1072 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 STAMBPL1Q96FJ0 436 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 ABHD17AQ96GS6 310 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 OR6C1Q96RD1 312 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 ZNF768Q9H5H4 540 aaKnown RBP15.46■□□□□ 0.07
CALD1-208ENST00000435928 ZNF624Q9P2J8 865 aaPredicted RBP15.46■□□□□ 0.07
CALD1-208ENST00000435928 KCTD3Q9Y597 815 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 PCDHB3Q9Y5E6 796 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 SLC30A1Q9Y6M5 507 aa15.46■□□□□ 0.07
CALD1-208ENST00000435928 SYCE3A1L190 88 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 APOL1O14791 398 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 VEGFDO43915 354 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 MTX2O75431 263 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 CDK14O94921 469 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 ZNF28P17035 718 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 BPIP17213 487 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 RPL10P27635 214 aaKnown RBP15.45■□□□□ 0.06
CALD1-208ENST00000435928 SLC19A1P41440 591 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 LEPRP48357 1165 aaKnown RBP15.45■□□□□ 0.06
CALD1-208ENST00000435928 SH3BP2P78314 561 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 FOXK1P85037 733 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 IL11RAQ14626 422 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 SLC14A2Q15849 920 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 SLC18A3Q16572 532 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 FAM182AQ5T1J6 154 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 SLC9A4Q6AI14 798 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 VSIG1Q86XK7 387 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 TRAPPC5Q8IUR0 188 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 RASGRP3Q8IV61 690 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 ZNF547Q8IVP9 402 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 RBM12BQ8IXT5 1001 aaKnown RBP15.45■□□□□ 0.06
CALD1-208ENST00000435928 GALNT6Q8NCL4 622 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 RSC1A1Q92681 617 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 CXorf40BQ96DE9 158 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 MAK16Q9BXY0 300 aaKnown RBP15.45■□□□□ 0.06
CALD1-208ENST00000435928 SLC25A51Q9H1U9 297 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 DEF6Q9H4E7 631 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 CROTQ9UKG9 612 aa15.45■□□□□ 0.06
CALD1-208ENST00000435928 PRR19A6NJB7 356 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 OR52A4PA6NMU1 304 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 KIAA0754O94854 1291 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 NDUFA10O95299 355 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 KRT1P04264 644 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 TMEM253P0C7T8 217 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 BRAFP15056 766 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 ZFXP17010 805 aaPredicted RBP15.44■□□□□ 0.06
CALD1-208ENST00000435928 VCLP18206 1134 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 IDSP22304 550 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 F8A1P23610 371 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 DRG2P55039 364 aaKnown RBP15.44■□□□□ 0.06
CALD1-208ENST00000435928 GTF2H3Q13889 308 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 GPR18Q14330 331 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 KHDC1Q4VXA5 237 aaKnown RBP15.44■□□□□ 0.06
CALD1-208ENST00000435928 ODF2Q5BJF6 829 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 ABRAXAS1Q6UWZ7 409 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 NPNTQ6UXI9 565 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 PRSS42Q7Z5A4 293 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 SPATA22Q8NHS9 363 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 GDAP1Q8TB36 358 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 TADA1Q96BN2 335 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 ZDHHC12Q96GR4 267 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 ELMO2Q96JJ3 720 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 OLFM3Q96PB7 478 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 VPS35Q96QK1 796 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 SRPK1Q96SB4 655 aaKnown RBP15.44■□□□□ 0.06
CALD1-208ENST00000435928 IFNKQ9P0W0 207 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 LNPEPQ9UIQ6 1025 aa15.44■□□□□ 0.06
CALD1-208ENST00000435928 A0A0A6YYK5 440 aaPredicted RBP15.43■□□□□ 0.06
CALD1-208ENST00000435928 C3orf70A6NLC5 250 aaPredicted RBP15.43■□□□□ 0.06
CALD1-208ENST00000435928 NDST3O95803 873 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 MT-CYBP00156 380 aaPredicted RBP15.43■□□□□ 0.06
CALD1-208ENST00000435928 HNRNPH3P31942 346 aaKnown RBP15.43■□□□□ 0.06
CALD1-208ENST00000435928 DYNLT1P63172 113 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 SRSF1Q07955 248 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■■■□□ 17.1
CALD1-208ENST00000435928 IGFBP7Q16270 282 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 AGAP9Q5VTM2 703 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 CACHD1Q5VU97 1274 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 IRGCQ6NXR0 463 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 CYB5D1Q6P9G0 228 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 WASH2PQ6VEQ5 465 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 FAM92BQ6ZTR7 304 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms