RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 ZNF624Q9P2J8 865 aaPredicted RBP21.49■■□□□ 1.03
RPUSD3-206ENST00000433535 PILRAQ9UKJ1 303 aa21.49■■□□□ 1.03
RPUSD3-206ENST00000433535 MN1Q10571 1320 aaPredicted RBP21.49■■□□□ 1.03
RPUSD3-206ENST00000433535 AKR1B15C9JRZ8 316 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 KMOO15229 486 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 GPR39O43194 453 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 PSTPIP1O43586 416 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 CDK14O94921 469 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 TYRP1P17643 537 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 RPL10P27635 214 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 NR2C2P49116 596 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 WNT3AP56704 352 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 ATP13A5Q4VNC0 1218 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 CEACAM20Q6UY09 585 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 TRIM48Q8IWZ4 208 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 SLC25A41Q8N5S1 370 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 RNF31Q96EP0 1072 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 TIMM29Q9BSF4 260 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 TRIM4Q9C037 500 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 EPB41L1Q9H4G0 881 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 STARD5Q9NSY2 213 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 KLHL8Q9P2G9 620 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 FAM153AQ9UHL3 310 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 TFR2Q9UP52 801 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 HEMK1Q9Y5R4 338 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 SLC30A1Q9Y6M5 507 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 TENM4Q6N022 2769 aa21.48■■□□□ 1.03
RPUSD3-206ENST00000433535 PRR19A6NJB7 356 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 VEGFDO43915 354 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 VIPP01282 170 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 XRCC1P18887 633 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 SLC19A1P41440 591 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 DRG2P55039 364 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 TBX2Q13207 712 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 SIRPB2Q5JXA9 342 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 XKR5Q6UX68 686 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 TMEM26Q6ZUK4 368 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 BZW1Q7L1Q6 419 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 PLXDC1Q8IUK5 500 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 TRAPPC5Q8IUR0 188 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 UNC5BQ8IZJ1 945 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 GDAP1Q8TB36 358 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 OXNAD1Q96HP4 312 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 VPS35Q96QK1 796 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 SPRY4Q9C004 299 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 FBXO8Q9NRD0 319 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 TRIM10Q9UDY6 481 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 ALG6Q9Y672 507 aa21.47■■□□□ 1.03
RPUSD3-206ENST00000433535 hCG_1818297A0A087WSY0 165 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 LOC285095A0A1B0GVY8 99 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 OR52A4PA6NMU1 304 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 UBXN7O94888 489 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 BRAFP15056 766 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 HMGCLP35914 325 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 TIPARPQ7Z3E1 657 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 C11orf96Q7Z7L8 435 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 CCDC50Q8IVM0 306 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 NLGN4XQ8N0W4 816 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 TTC30BQ8N4P2 665 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 IPMKQ8NFU5 416 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 NLGN4YQ8NFZ3 816 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 P3H4Q92791 437 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 MRGPRX2Q96LB1 330 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 TGM7Q96PF1 710 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 SRPK1Q96SB4 655 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 GPN2Q9H9Y4 310 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 UCK1Q9HA47 277 aa21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 SIDT1Q9NXL6 827 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 TLN1Q9Y490 2541 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-206ENST00000433535 SPTA1P02549 2419 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 STK17BO94768 372 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 C9P02748 559 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 ANKRD34CP0C6C1 535 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 LEPRP48357 1165 aaKnown RBP21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 TFDP3Q5H9I0 405 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 FAM151BQ6UXP7 276 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 ZNF567Q8N184 647 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 RSC1A1Q92681 617 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 C9orf72Q96LT7 481 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 QKIQ96PU8 341 aaKnown RBP eCLIP21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 IL26Q9NPH9 171 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 POT1Q9NUX5 634 aa21.45■■□□□ 1.02
RPUSD3-206ENST00000433535 FLNBO75369 2602 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 LOC101059948A0A1B0GTJ6 334 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 POLR1CO15160 346 aaPredicted RBP21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 MTSS1O43312 755 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 BUD23O43709 281 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 AMD1P17707 334 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 CA5AP35218 305 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 SPAM1P38567 509 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 MAGEA1P43355 309 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 SEPHS1P49903 392 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 HADHBP55084 474 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 FOXM1Q08050 763 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 TMEM115Q12893 351 aaPredicted RBP21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 GTF2H3Q13889 308 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 GPR18Q14330 331 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 CHRNA6Q15825 494 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 BORAQ6PGQ7 559 aa21.44■■□□□ 1.02
RPUSD3-206ENST00000433535 ABRAXAS1Q6UWZ7 409 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms