RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DENND1AQ8TEH3 1009 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 OIT3Q8WWZ8 545 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 RND1Q92730 232 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 VPS33AQ96AX1 596 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF653Q96CK0 615 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 FER1L6-AS2Q96M78 137 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 CAMK1GQ96NX5 476 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 NEK1Q96PY6 1258 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 ADPGKQ9BRR6 497 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLC25A33Q9BSK2 321 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 ABHD6Q9BV23 337 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLITRK6Q9H5Y7 841 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 DNAJC18Q9H819 358 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 MCM9Q9NXL9 1143 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 HAO2Q9NYQ3 351 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 BCCIPQ9P287 314 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 C11orf21Q9P2W6 132 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE2DQ9UEU5 116 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 HACL1Q9UJ83 578 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 TUBE1Q9UJT0 475 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 DBNLQ9UJU6 430 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 NOL7Q9UMY1 257 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 PCDHAC2Q9Y5I4 1007 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 PEG3Q9GZU2 1588 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 SMARCA4P51532 1647 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 IGLV5-52A0A0A0MRZ9 124 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 A0A1B0GVT2 93 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 DNAJC9-AS1A6NH13 148 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 HEPACAM2A8MVW5 462 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 SOCS6O14544 535 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 NDUFS4O43181 175 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 OR10H2O60403 315 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 WISP2O76076 250 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 GGPS1O95749 300 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 CH25HO95992 272 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 CCDC175P0C221 793 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 DANCRP0C864 163 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 IGHV4-30-4P0DP06 118 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 SRCP12931 536 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 KCNA5P22460 613 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PTAFRP25105 342 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 BDKRB2P30411 391 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 ARRB2P32121 409 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 NR4A2P43354 598 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 ENTPD1P49961 510 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 HNRNPKP61978 463 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 FOXM1Q08050 763 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 CRYZQ08257 329 aaKnown RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 COG2Q14746 738 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 RABEP1Q15276 862 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 ETFDHQ16134 617 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 FAM98BQ52LJ0 330 aaKnown RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 TDRD12Q587J7 1177 aaKnown RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 FSCBQ5H9T9 825 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 EFHC1Q5JVL4 640 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PXDC1Q5TGL8 231 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 TRAT1Q6PIZ9 186 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 DCLRE1AQ6PJP8 1040 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 SUSD1Q6UWL2 747 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PM20D2Q8IYS1 436 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 DSELQ8IZU8 1212 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PELI3Q8N2H9 469 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 CLIP4Q8N3C7 705 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 RBMXL3Q8N7X1 1067 aaKnown RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PI4KAP1Q8N8J0 262 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZBTB8BQ8NAP8 495 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 ACVR1CQ8NER5 493 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 BBS10Q8TAM1 723 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PTERQ96BW5 349 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 ORAI1Q96D31 301 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 NAA11Q9BSU3 229 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 HGH1Q9BTY7 390 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLC25A23Q9BV35 468 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 DCLK3Q9C098 648 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 FOXP1Q9H334 677 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 OPA3Q9H6K4 179 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 NOX4Q9NPH5 578 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PRMT7Q9NVM4 692 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 RCC2Q9P258 522 aaKnown RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 FZD10Q9ULW2 581 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 PTGDR2Q9Y5Y4 395 aa3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 ATXN2Q99700 1313 aaKnown RBP3.1□□□□□ -1.91
HMGB1P27-201ENST00000431429 AQRO60306 1485 aaKnown RBP eCLIP3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAPVD1Q14C86 1478 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 URB2Q14146 1524 aaKnown RBP3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF608Q9ULD9 1512 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 ERCC6L2Q5T890 1561 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMEM221A6NGB7 291 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TSPY2A6NKD2 308 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 J3QR06 171 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 DVL1O14640 695 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 PTGESO14684 152 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TO15178 435 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLCO2B1O94956 709 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 SIX3O95343 332 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 BCL10O95999 233 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 LINGO3P0C6S8 592 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TSPY3P0CV98 308 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TSPY8P0CW00 308 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 NMBRP28336 390 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms