RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 INTS14Q96SY0 518 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 TEKT3Q9BXF9 490 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 C1QTNF7Q9BXJ2 289 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 TRIM9Q9C026 710 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SCAND2PQ9GZW5 306 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 GAREM1Q9H706 876 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 RNPEPL1Q9HAU8 725 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 FBXO28Q9NVF7 368 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MRPL15Q9P015 296 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 GSKIPQ9P0R6 139 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 CXXC1Q9P0U4 656 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 RCOR3Q9P2K3 495 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MYEF2Q9P2K5 600 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SCML1Q9UN30 329 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PLAGL2Q9UPG8 496 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 VWA7Q9Y334 891 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 DHRS7Q9Y394 339 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PTRH2Q9Y3E5 179 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 GMPPBQ9Y5P6 360 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 WIF1Q9Y5W5 379 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 AP4B1Q9Y6B7 739 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 NCOA1Q15788 1441 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 NPHP3Q7Z494 1330 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 M0R296 226 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 CYR61O00622 381 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SH2B2O14492 632 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 FLRT2O43155 660 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PRKD3O94806 890 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 TGFAP01135 160 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 FUCA1P04066 466 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 KLK3P07288 261 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 OR4E1P0C645 316 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF7P17097 686 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 RAB3AP20336 220 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 EFNA1P20827 205 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 CXCR2P25025 360 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ACVR2AP27037 513 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 GPR3P46089 330 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 CLCN7P51798 805 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PLEKHN1Q494U1 663 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 FASTKD1Q53R41 847 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 TCHHL1Q5QJ38 904 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 RAP1GAP2Q684P5 730 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 HAUS6Q7Z4H7 955 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 HPS6Q86YV9 775 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ATP6V0D2Q8N8Y2 350 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 TTC16Q8NEE8 873 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 OR52M1Q8NGK5 317 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SLC13A3Q8WWT9 602 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 UTP4Q969X6 686 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PLEKHA8Q96JA3 519 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MAP3K3Q99759 626 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PTPN18Q99952 460 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SEMA3CQ99985 751 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 GTPBP2Q9BX10 602 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SLCO5A1Q9H2Y9 848 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 FBXO44Q9H4M3 255 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ASCL3Q9NQ33 180 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MGAT4CQ9UBM8 478 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 GNG8Q9UK08 70 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SAC3D1A6NKF1 404 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 J3QRK9 145 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SULT1C2O00338 296 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PIP5K1BO14986 540 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SHBGP04278 402 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 BRAFP15056 766 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 NQO2P16083 231 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 EPORP19235 508 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 EPHX2P34913 555 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 CEBPAP49715 358 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MAP4K2Q12851 820 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 DNASE1L3Q13609 305 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PRAMEF14Q5SWL7 426 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 RASAL3Q86YV0 1011 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 DDIASQ8IXT1 998 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 AGGF1Q8N302 714 aaeCLIP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SLC35G2Q8TBE7 412 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 LKAAEAR1Q8TD35 194 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 OIT3Q8WWZ8 545 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PHYHIPQ92561 330 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 FBXL8Q96CD0 374 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 FOXRED1Q96CU9 486 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SF3B5Q9BWJ5 86 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SPATA9Q9BWV2 254 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ADGRE3Q9BY15 652 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 OSBPL6Q9BZF3 934 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 BTBD1Q9H0C5 482 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SAP130Q9H0E3 1048 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 C2orf40Q9H1Z8 148 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MTG2Q9H4K7 406 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF552Q9H707 407 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 CHRNA9Q9UGM1 479 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MGAT4AQ9UM21 535 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 MAP3K2Q9Y2U5 619 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 HYOU1Q9Y4L1 999 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 HFM1A2PYH4 1435 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 OR6C75A6NL08 312 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 C2CD2LO14523 706 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 GPR39O43194 453 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms