RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NFATC2Q13469 925 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 TRIM25Q14258 630 aaKnown RBP13.8□□□□□ -0.2
HOXC4-202ENST00000430889 PCBP2Q15366 365 aaKnown RBP eCLIP13.8□□□□□ -0.2
HOXC4-202ENST00000430889 TGFBIQ15582 683 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 FBXO48Q5FWF7 155 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 C6orf10Q5SRN2 563 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 LILRA2Q8N149 483 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 RNF148Q8N7C7 305 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 RIN3Q8TB24 985 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.8□□□□□ -0.2
HOXC4-202ENST00000430889 ISG20Q96AZ6 181 aaKnown RBP13.8□□□□□ -0.2
HOXC4-202ENST00000430889 ROPN1LQ96C74 230 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 SLC46A2Q9BY10 475 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 EBF3Q9H4W6 596 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 ZFYVE1Q9HBF4 777 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 MRPL40Q9NQ50 206 aaKnown RBP13.8□□□□□ -0.2
HOXC4-202ENST00000430889 ABCD2Q9UBJ2 740 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 BTRCQ9Y297 605 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 PRSS21Q9Y6M0 314 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 CLDN7O95471 211 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 IGSF6O95976 241 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 C8AP07357 584 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 LINC00032P0C843 101 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 SRCP12931 536 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 CAPN3P20807 821 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 ACRV1P26436 265 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 CCR2P41597 374 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 AQP4P55087 323 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 STX1BP61266 288 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 GRIK2Q13002 908 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 FAM151BQ6UXP7 276 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 MACC1Q6ZN28 852 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 CCDC149Q6ZUS6 474 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 EFL1Q7Z2Z2 1120 aaKnown RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 SPATA19Q7Z5L4 167 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 MIER2Q8N344 545 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 FIBCD1Q8N539 461 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 PDPRQ8NCN5 879 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 OR2AP1Q8NGE2 309 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 TSPEARQ8WU66 669 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 CLP1Q92989 425 aaKnown RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 BRINP2Q9C0B6 783 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 ATP13A3Q9H7F0 1226 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 SPAG4Q9NPE6 437 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 AIG1Q9NVV5 245 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 PLK2Q9NYY3 685 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 EIF2B4Q9UI10 523 aaKnown RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 CROTQ9UKG9 612 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 HS3ST2Q9Y278 367 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 FNDC3AQ9Y2H6 1198 aaKnown RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 C1orf232A0A0U1RR37 186 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 A0A1W2PRU2 124 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 TCRBV3S1A0A5B6 114 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 DPPA5A6NC42 116 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 NCF1BA6NI72 391 aaPredicted RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 EIF4E1BA6NMX2 242 aaKnown RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 NCF1CA8MVU1 366 aaPredicted RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 E5RI56 91 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 LRG1P02750 347 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 HGFP14210 728 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 NCF1P14598 390 aaPredicted RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 ZNF7P17097 686 aaPredicted RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 GJA1P17302 382 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 CTSOP43234 321 aaPredicted RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 EPHA5P54756 1037 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 PTPN5P54829 565 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 TRIP10Q15642 601 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 MMEL1Q495T6 779 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 PITRM1Q5JRX3 1037 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 LYPLAL1Q5VWZ2 237 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 OR52E8Q6IFG1 317 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 ADAMTSL2Q86TH1 951 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 DDIASQ8IXT1 998 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 TMEM102Q8N9M5 508 aaPredicted RBP13.79□□□□□ -0.2
HOXC4-202ENST00000430889 FAM156AQ8NDB6 213 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 OR2T11Q8NH01 316 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 BTBD9Q96Q07 612 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 HGH1Q9BTY7 390 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 TNKS2Q9H2K2 1166 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 LATS2Q9NRM7 1088 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 ADA2Q9NZK5 511 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 GNPTGQ9UJJ9 305 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 APPL1Q9UKG1 709 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 NDUFAF1Q9Y375 327 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
HOXC4-202ENST00000430889 MAGEA13PA6NCF6 341 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
HOXC4-202ENST00000430889 MOSPD3O75425 235 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 GLUD1P00367 558 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 LINGO3P0C6S8 592 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 ACRP10323 421 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 IDO1P14902 403 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms