RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 CCDC70Q6NSX1 233 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 DARS2Q6PI48 645 aaKnown RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 XKR5Q6UX68 686 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 FAM151BQ6UXP7 276 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 ZFAND4Q86XD8 727 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 KLHDC8BQ8IXV7 354 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 USP7Q93009 1102 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 KCNK4Q9NYG8 393 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 DNAJC16Q9Y2G8 782 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 PCDHGA7Q9Y5G6 932 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 TLN1Q9Y490 2541 aaKnown RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 CDK14O94921 469 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 METTL18O95568 372 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 PRB1P04280 392 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 JMJD7P0C870 316 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 THRAP10827 490 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 HLA-DPA1P20036 260 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 SLC19A1P41440 591 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 MLLT3P42568 568 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-204ENST00000430682 CLCNKAP51800 687 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 GEMP55040 296 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 GDF10P55107 478 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 HHEXQ03014 270 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 ARHGAP40Q5TG30 622 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 PEX26Q7Z412 305 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 GLT6D1Q7Z4J2 308 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 JAMLQ86YT9 394 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 PHYKPLQ8IUZ5 450 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 CDKL3Q8IVW4 592 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-204ENST00000430682 RASGEF1AQ8N9B8 481 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 OR13C4Q8NGS5 318 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 HES6Q96HZ4 224 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 CALR3Q96L12 384 aaKnown RBP12.33□□□□□ -0.44
SMPD4-204ENST00000430682 SPATA13Q96N96 652 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 DPH1Q9BZG8 443 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 SARS2Q9NP81 518 aaKnown RBP12.33□□□□□ -0.44
SMPD4-204ENST00000430682 RAD18Q9NS91 495 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 OGFRQ9NZT2 677 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 PDP2Q9P2J9 529 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 CPNE7Q9UBL6 633 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 WDR37Q9Y2I8 494 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 SLC30A1Q9Y6M5 507 aa12.33□□□□□ -0.44
SMPD4-204ENST00000430682 GLYATL1P3A0A0U1RQE8 302 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 CCL22O00626 93 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 KMOO15229 486 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 NVLO15381 856 aaKnown RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 SGTAO43765 313 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 WT1P19544 449 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 RPL10P27635 214 aaKnown RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 SPAM1P38567 509 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 DRG2P55039 364 aaKnown RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 XIAPP98170 497 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 KIF5AQ12840 1032 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 BIRC2Q13490 618 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 CLCA4Q14CN2 919 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 INSCQ1MX18 579 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 GPRC6AQ5T6X5 926 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 KCTD11Q693B1 232 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 FAM83HQ6ZRV2 1179 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 GPR155Q7Z3F1 870 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 LRRTM4Q86VH4 590 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 TAB3Q8N5C8 712 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 FAM71DQ8N9W8 422 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 OR4K2Q8NGD2 314 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 SLC35B2Q8TB61 432 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 DTX3LQ8TDB6 740 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 ATG4AQ8WYN0 398 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 SRPK1Q96SB4 655 aaKnown RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 SLC38A3Q99624 504 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 OSGEPL1Q9H4B0 414 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 HACD3Q9P035 362 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 FKBPLQ9UIM3 349 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 ACSL6Q9UKU0 697 aa12.32□□□□□ -0.44
SMPD4-204ENST00000430682 SNRNP200O75643 2136 aaKnown RBP12.32□□□□□ -0.44
SMPD4-204ENST00000430682 C5orf60A6NFR6 353 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 OR52A4PA6NMU1 304 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 A8MU76 341 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 VEGFDO43915 354 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 C1QL1O75973 258 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 ANXA9O76027 345 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 TJP3O95049 919 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 XRCC1P18887 633 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-204ENST00000430682 PEX6Q13608 980 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 SNAP47Q5SQN1 464 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 ITPRIPL1Q6GPH6 555 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 TMEM71Q6P5X7 295 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 TMEM220Q6QAJ8 160 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 ABRAXAS1Q6UWZ7 409 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 ARHGAP22Q7Z5H3 698 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 DTX1Q86Y01 620 aa12.31□□□□□ -0.44
SMPD4-204ENST00000430682 BEND7Q8N7W2 519 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-204ENST00000430682 BMPERQ8N8U9 685 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms