RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CILP2Q8IUL8 1156 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 CMTR2Q8IYT2 770 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 NATD1Q8N6N6 113 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ZSCAN18Q8TBC5 510 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 RORBQ92753 470 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 RTP4Q96DX8 246 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SLC47A1Q96FL8 570 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 HAPLN2Q9GZV7 340 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PNPLA3Q9NST1 481 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 NFS1Q9Y697 457 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 FFAR3O14843 346 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 DCLK1O15075 740 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 GPR42O15529 346 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PRPS2P11908 318 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ABRQ12979 859 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 GDPD4Q6W3E5 623 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 CCDC81Q6ZN84 652 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 RTL10Q7L3V2 364 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 MICU2Q8IYU8 434 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SPATA6LQ8N4H0 392 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PQLC3Q8N755 202 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 C2CD4AQ8NCU7 369 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 OTUB2Q96DC9 234 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 C1orf21Q9H246 121 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 DNAAF2Q9NVR5 837 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ADGRE2Q9UHX3 823 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PSMD13Q9UNM6 376 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ANKRD66B4E2M5 251 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 M0QZQ0 153 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ARHGEF9O43307 516 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 LYPLA1O75608 230 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 TCF4P15884 667 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 CSKP41240 450 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 C10orf62Q5T681 223 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 TXNRD3NBQ6F5E7 133 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 GCNT7Q6ZNI0 430 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ZC3HC1Q86WB0 502 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 CIR1Q86X95 450 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 NAT16Q8N8M0 369 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 DNAJB14Q8TBM8 379 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 AP2M1Q96CW1 435 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ABCB8Q9NUT2 735 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PEX1O43933 1283 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 PRAMEF11O60813 436 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 OAZ2O95190 189 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 FSTL5Q8N475 847 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF781Q8N8C0 355 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 OR4A15Q8NGL6 344 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 CENPIQ92674 756 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 GLMNQ92990 594 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 SPACA7Q96KW9 195 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 FERD3LQ96RJ6 166 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 TMED5Q9Y3A6 229 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 EDDM13A0A1B0GTR0 161 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 G3V2T6 193 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 TM4SF4P48230 202 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 CARD16Q5EG05 197 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 WDTC1Q8N5D0 677 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 TRIB3Q96RU7 358 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 POLR3HQ9Y535 204 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 SYNDIG1LA6NDD5 238 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 SRPRAP08240 638 aaKnown RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 ENO2P09104 434 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 AP5B1Q2VPB7 878 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 HHIPL1Q96JK4 782 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 ZDHHC3Q9NYG2 299 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 NPPAP01160 153 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 ADH5P11766 374 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 OTUD3Q5T2D3 398 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 TRMT10BQ6PF06 316 aaKnown RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 DENND6AQ8IWF6 608 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 PQLC1Q8N2U9 271 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 TOP1MTQ969P6 601 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 S100A14Q9HCY8 104 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 MKS1Q9NXB0 559 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 SLC9A8Q9Y2E8 581 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 TK2O00142 265 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 LRRC70Q7Z2Q7 622 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 DCAF4L2Q8NA75 395 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 ADAM7Q9H2U9 754 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 FANCEQ9HB96 536 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 OR6K2Q8NGY2 324 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 HIC2Q96JB3 615 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF317Q96PQ6 595 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 DERL2Q9GZP9 239 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 EPB41L4BQ9H329 900 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 EVLQ9UI08 416 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-208ENST00000430669 BTRCQ9Y297 605 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 INSL5Q9Y5Q6 135 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 MGAMO43451 1857 aa11.43□□□□□ -0.58
PTCH1-208ENST00000430669 ENPP3O14638 875 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 AOC2O75106 756 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 CST5P28325 142 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 SLC14A2Q15849 920 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms