RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MEIS3P2A8K0S8 358 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 H3BSA7 217 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 TMEM189-UBE2V1I3L0A0 370 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 NR5A2O00482 541 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 AURKAO14965 403 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 LDB2O43679 373 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 RAMP2O60895 175 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 EEDO75530 441 aaKnown RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 CDK14O94921 469 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 OAZ2O95190 189 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 RASAL1O95294 804 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 NDST3O95803 873 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 MOCS2O96007 188 aaPredicted RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 GOT2P00505 430 aaKnown RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 CHRNA1P02708 482 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 UROSP10746 265 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 GFAPP14136 432 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF37AP17032 561 aaPredicted RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 IGFBP6P24592 240 aaPredicted RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 BRCC3P46736 316 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PLK1P53350 603 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ERVK-21P61565 698 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 SH3BP2P78314 561 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 HPCAP84074 193 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PRR20EP86478 221 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PRR20CP86479 221 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PRR20DP86480 221 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PRR20BP86481 221 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PRR20AP86496 221 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 DSC2Q02487 901 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 RING1Q06587 406 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 MERTKQ12866 999 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 RALGDSQ12967 914 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 SERINC3Q13530 473 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 POLD3Q15054 466 aaPredicted RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 GEN1Q17RS7 908 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PDCD4Q53EL6 469 aaKnown RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF789Q5FWF6 425 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 MS4A13Q5J8X5 152 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PIK3R6Q5UE93 754 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ALG1LQ6GMV1 187 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 HMBOX1Q6NT76 420 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 TTC33Q6PID6 262 aaPredicted RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 AFTPHQ6ULP2 937 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 TMEM207Q6UWW9 146 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 LPCAT2Q7L5N7 544 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF354CQ86Y25 554 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PHYKPLQ8IUZ5 450 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 SLC15A3Q8IY34 581 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 FBXO39Q8N4B4 442 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 OR4L1Q8NH43 312 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 OSCP1Q8WVF1 389 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 CANT1Q8WVQ1 401 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 SEPT8Q92599 483 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 EDAQ92838 391 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 LPPQ93052 612 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 LRRC58Q96CX6 371 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 PABPC5Q96DU9 382 aaKnown RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ATOH8Q96SQ7 321 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 SLC29A1Q99808 456 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 TUBA1CQ9BQE3 449 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ZCWPW1Q9H0M4 648 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ATXN3LQ9H3M9 355 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 NMUR1Q9HB89 426 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 AGPAT4Q9NRZ5 378 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 TRMT13Q9NUP7 481 aaKnown RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 DUS2Q9NX74 493 aaKnown RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 TAS2R13Q9NYV9 303 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ZIM2Q9NZV7 527 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 MPP6Q9NZW5 540 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 MAP10Q9P2G4 905 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 UXTQ9UBK9 157 aaPredicted RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 AP3M1Q9Y2T2 418 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 SETXQ7Z333 2677 aaKnown RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 OTOGLQ3ZCN5 2332 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 RNF103-CHMP3A0A140T963 221 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 FAM92AA1XBS5 289 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 LINC01553A4QN01 128 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PRR23AA6NEV1 266 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 H0YAE9 185 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 NME4O00746 187 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 GIPC1O14908 333 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PIP5K1BO14986 540 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 MSI1O43347 362 aaKnown RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 KLK8O60259 260 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PRAMEF11O60813 436 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 TIPRLO75663 272 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 CSPG5O95196 566 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SERPINF2P08697 491 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ALDOCP09972 364 aaKnown RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PRR35P0CG20 571 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 HGFP14210 728 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PCSK2P16519 638 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ATP6V1B2P21281 511 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SLC6A2P23975 617 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 YWHAQP27348 245 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 HTR1EP28566 365 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SLC5A2P31639 672 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 237 ms