RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 KIAA1671Q9BY89 1806 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CAPNS1P04632 268 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CYBBP04839 570 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 ZCCHC18P0CG32 403 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PPM1AP35813 382 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 RGS4P49798 205 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CHN2P52757 468 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 TLE2Q04725 743 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 BNIP2Q12982 314 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 TGFBIQ15582 683 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 EML3Q32P44 896 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 TRIM60Q495X7 471 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 XKR7Q5GH72 579 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 MPP7Q5T2T1 576 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 DHFR2Q86XF0 187 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 TICAM1Q8IUC6 712 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CPXM2Q8N436 756 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 MARVELD2Q8N4S9 558 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 GRIN3AQ8TCU5 1115 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 ADAMTS19Q8TE59 1207 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PIH1D2Q8WWB5 315 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 SLC22A12Q96S37 553 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 GPATCH1Q9BRR8 931 aaKnown RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 ZFYVE1Q9HBF4 777 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 ABCD2Q9UBJ2 740 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 SH3BP1Q9Y3L3 701 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 TCRBV3S1A0A5B6 114 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 E2F3O00716 465 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 PRAMEF1O95521 474 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 IGSF6O95976 241 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 CTPS1P17812 591 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 SLC7A1P30825 629 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 AGTR2P50052 363 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 KCNK10P57789 538 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 GRM2Q14416 872 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 MPPE1Q53F39 396 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 TXNDC8Q6A555 127 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 SNX20Q7Z614 316 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 SNX31Q8N9S9 440 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 CENPKQ9BS16 269 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 TRIM54Q9BYV2 358 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 TM6SF2Q9BZW4 377 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 PCDHAC1Q9H158 963 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 ATP13A3Q9H7F0 1226 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 IL21Q9HBE4 155 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 AIG1Q9NVV5 245 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 KIAA1522Q9P206 1035 aaPredicted RBP13.54□□□□□ -0.24
THBS3-202ENST00000428962 EIF2B4Q9UI10 523 aaKnown RBP13.54□□□□□ -0.24
THBS3-202ENST00000428962 GPR45Q9Y5Y3 372 aa13.54□□□□□ -0.24
THBS3-202ENST00000428962 OBSL1O75147 1896 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 H0YJX3 145 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 SCAMP3O14828 347 aaKnown RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 RAD51BO15315 384 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 HTRA2O43464 458 aaPredicted RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 TRBC1P01850 177 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 CKMP06732 381 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 ALPIP09923 528 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 CAPN3P20807 821 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 HK3P52790 923 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 NME5P56597 212 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 ERVK-8P63133 956 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 SLC7A9P82251 487 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 PCBP2Q15366 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
THBS3-202ENST00000428962 PDCD4Q53EL6 469 aaKnown RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 C6orf10Q5SRN2 563 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 IL23RQ5VWK5 629 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 BLOC1S3Q6QNY0 202 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 RETREG3Q86VR2 466 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 SERPINA9Q86WD7 417 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 HOMEZQ8IX15 550 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 LILRA2Q8N149 483 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 MYO1HQ8N1T3 1032 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 TMEM102Q8N9M5 508 aaPredicted RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 OR2T34Q8NGX1 318 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 OR2T3Q8NH03 318 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 WFDC5Q8TCV5 224 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 ZUFSPQ96AP4 578 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 BRINP2Q9C0B6 783 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 YIPF3Q9GZM5 350 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 MUC13Q9H3R2 512 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 RC3H2Q9HBD1 1191 aaKnown RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 GIMAP2Q9UG22 337 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 TBX21Q9UL17 535 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 TIMM22Q9Y584 194 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 C1orf232A0A0U1RR37 186 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 AP1G1O43747 822 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 RNASEH2AO75792 299 aaKnown RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 HSD17B1P14061 328 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 GABRR2P28476 465 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 SERPINA4P29622 427 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 VPS26BQ4G0F5 336 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 C1orf53Q5VUE5 145 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 FAM151BQ6UXP7 276 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 HTR3DQ70Z44 454 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 CAMK1DQ8IU85 385 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms