RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 OR1D5P58170 312 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 SPIDRQ14159 915 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 PLA2G4EQ3MJ16 856 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 TTC27Q6P3X3 843 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 GFM1Q96RP9 751 aaKnown RBP16.45■□□□□ 0.22
VRK2-204ENST00000428021 OSBPL9Q96SU4 736 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 TIMM29Q9BSF4 260 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 CASS4Q9NQ75 786 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 PRDM8Q9NQV8 689 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 ACACAQ13085 2346 aa16.45■□□□□ 0.22
VRK2-204ENST00000428021 RHPN2P1A8MT19 583 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 D6RAR5 112 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 H7C0S8 307 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 SNX2O60749 519 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 APRTP07741 180 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 F3P13726 295 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 GPR3P46089 330 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 FASLGP48023 281 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 CDH17Q12864 832 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 SEPT6Q14141 434 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 GSE1Q14687 1217 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 CYP1B1Q16678 543 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 INSCQ1MX18 579 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.44■□□□□ 0.22
VRK2-204ENST00000428021 GSTA5Q7RTV2 222 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 TMPRSS9Q7Z410 1059 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 B3GNT8Q7Z7M8 397 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 PROSER1Q86XN7 944 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 TRAPPC5Q8IUR0 188 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 STYXQ8WUJ0 223 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 GRAMD1AQ96CP6 724 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 NXPE2Q96DL1 559 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 CCDC97Q96F63 343 aaPredicted RBP16.44■□□□□ 0.22
VRK2-204ENST00000428021 ATXN7L3BQ96GX2 97 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 CDKN2AIPNLQ96HQ2 116 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 AP1M1Q9BXS5 423 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 FAM96AQ9H5X1 160 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 SYNDIG1Q9H7V2 258 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 SCHIP1Q9P0W5 487 aaPredicted RBP16.44■□□□□ 0.22
VRK2-204ENST00000428021 ATXN7L1Q9ULK2 861 aaPredicted RBP16.44■□□□□ 0.22
VRK2-204ENST00000428021 SNX12Q9UMY4 172 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 CELSR3Q9NYQ7 3312 aa16.44■□□□□ 0.22
VRK2-204ENST00000428021 TRBV5-4A0A0C4DH59 114 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 E7EVH7 732 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 ZNF185O15231 689 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 SGTAO43765 313 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 MC4RP32245 332 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 LMAN1P49257 510 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 CDKN1CP49918 316 aaPredicted RBP16.43■□□□□ 0.22
VRK2-204ENST00000428021 ARSDP51689 593 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 GTF2H3Q13889 308 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 CCDC38Q502W7 563 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 TMEM220Q6QAJ8 160 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 C4orf22Q6V702 233 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 PPP1R21Q6ZMI0 780 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 SNX20Q7Z614 316 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 NXPE1Q8N323 547 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 DNAAF3Q8N9W5 541 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 ACTRT1Q8TDG2 376 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 NAT14Q8WUY8 206 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 TTC25Q96NG3 672 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 ZCCHC2Q9C0B9 1178 aaKnown RBP16.43■□□□□ 0.22
VRK2-204ENST00000428021 SARS2Q9NP81 518 aaKnown RBP16.43■□□□□ 0.22
VRK2-204ENST00000428021 EIF2B3Q9NR50 452 aaKnown RBP16.43■□□□□ 0.22
VRK2-204ENST00000428021 DNAJC16Q9Y2G8 782 aa16.43■□□□□ 0.22
VRK2-204ENST00000428021 DSPP15924 2871 aaKnown RBP16.42■□□□□ 0.22
VRK2-204ENST00000428021 CCDC78A2IDD5 438 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 OR2AG2A6NM03 316 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 PGRMC1O00264 195 aaKnown RBP16.42■□□□□ 0.22
VRK2-204ENST00000428021 CES2O00748 559 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 POP7O75817 140 aaKnown RBP16.42■□□□□ 0.22
VRK2-204ENST00000428021 PRSS56P0CW18 603 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 BRAFP15056 766 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 MSH3P20585 1137 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 ITGALP20701 1170 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 CD1CP29017 333 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 ALDH4A1P30038 563 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
VRK2-204ENST00000428021 ABRAXAS1Q6UWZ7 409 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 WASH2PQ6VEQ5 465 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 ZNF761Q86XN6 746 aaPredicted RBP16.42■□□□□ 0.22
VRK2-204ENST00000428021 MAGOHBQ96A72 148 aaKnown RBP16.42■□□□□ 0.22
VRK2-204ENST00000428021 ULK4Q96C45 1275 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 SGF29Q96ES7 293 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 RANBP9Q96S59 729 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 FOXP3Q9BZS1 431 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 OSGEPL1Q9H4B0 414 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 WASH6PQ9NQA3 447 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 CRLS1Q9UJA2 301 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 NEU2Q9Y3R4 380 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 DNMT3AQ9Y6K1 912 aaPredicted RBP16.42■□□□□ 0.22
VRK2-204ENST00000428021 AK5Q9Y6K8 562 aa16.42■□□□□ 0.22
VRK2-204ENST00000428021 LAMA5O15230 3695 aa16.41■□□□□ 0.22
VRK2-204ENST00000428021 CACNA1BQ00975 2339 aa16.41■□□□□ 0.22
VRK2-204ENST00000428021 IGLV3-16A0A075B6K0 115 aa16.41■□□□□ 0.22
VRK2-204ENST00000428021 IGHV1OR21-1A0A087WYE8 117 aa16.41■□□□□ 0.22
VRK2-204ENST00000428021 KIR2DS5A0A0G2JLQ3 304 aa16.41■□□□□ 0.22
VRK2-204ENST00000428021 A0A0G2JNG1 304 aa16.41■□□□□ 0.22
VRK2-204ENST00000428021 TCRBV7S3A2A0A539 114 aa16.41■□□□□ 0.22
VRK2-204ENST00000428021 PMS2P1A4D2B8 440 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms