RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SNX20Q7Z614 316 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 C11orf96Q7Z7L8 435 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ADGRG6Q86SQ4 1221 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 CCNJLQ8IV13 435 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ARL14Q8N4G2 192 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 FAM71DQ8N9W8 422 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 KYQ8NBH2 561 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 OR4D9Q8NGE8 314 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 CCDC110Q8TBZ0 833 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ACTRT1Q8TDG2 376 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ZCCHC14Q8WYQ9 949 aaKnown RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 GFM1Q96RP9 751 aaKnown RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 TMEM121Q9BTD3 319 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 LRRN3Q9H3W5 708 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 MRPL40Q9NQ50 206 aaKnown RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 NLE1Q9NVX2 485 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 UBP1Q9NZI7 540 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 LRIT1Q9P2V4 623 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ATXN10Q9UBB4 475 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ACSL5Q9ULC5 683 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 PACSIN2Q9UNF0 486 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 SHOC2Q9UQ13 582 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 A0A1W2PQM1 296 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 HEATR9A2RTY3 570 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 CDRT15L2A8MXV6 281 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 CSO75390 466 aaKnown RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 SRP72O76094 671 aaKnown RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 CELA2BP08218 269 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ANKRD34CP0C6C1 535 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF7P17097 686 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF8P17098 575 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 TPSB2P20231 275 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ITGALP20701 1170 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 IDSP22304 550 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 NDUFS1P28331 727 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 PPARGP37231 505 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 UCNP55089 124 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 UBE2IP63279 158 aaKnown RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 RPA4Q13156 261 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 TPSAB1Q15661 275 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 TBC1D25Q3MII6 688 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 PERM1Q5SV97 790 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 KCTD16Q68DU8 428 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 PACS1Q6VY07 963 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 KDM7AQ6ZMT4 941 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 RFLNAQ6ZTI6 216 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 PIM3Q86V86 326 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 SLITRK4Q8IW52 837 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 MPP5Q8N3R9 675 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF398Q8TD17 642 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 BLOC1S5Q8TDH9 187 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 LRRN4Q8WUT4 740 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 SNRNP27Q8WVK2 155 aaKnown RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 FGF11Q92914 225 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 SLCO2A1Q92959 643 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 CCDC74AQ96AQ1 378 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 TTC25Q96NG3 672 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 SLC46A1Q96NT5 459 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 FICDQ9BVA6 458 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 DPH1Q9BZG8 443 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 VPS37BQ9H9H4 285 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 MRM3Q9HC36 420 aaKnown RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 LZTFL1Q9NQ48 299 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 THSD1Q9NS62 852 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 SEMA5BQ9P283 1151 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 RNF14Q9UBS8 474 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 EPHA6Q9UF33 1036 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 CD84Q9UIB8 345 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ZMIZ1Q9ULJ6 1067 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 PTPRQQ9UMZ3 2332 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF148Q9UQR1 794 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 R3HDM2Q9Y2K5 976 aaKnown RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 PCDHGA3Q9Y5H0 932 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ENTPD2Q9Y5L3 495 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ST14Q9Y5Y6 855 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 OAS3Q9Y6K5 1087 aaKnown RBP9.01□□□□□ -0.97
SMC1A-203ENST00000428014 ASPMQ8IZT6 3477 aa9.01□□□□□ -0.97
SMC1A-203ENST00000428014 CHD6Q8TD26 2715 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 A0A0U1RQJ8 604 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CPED1A4D0V7 1026 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 MGAT4DA6NG13 374 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 RHPN2P1A8MT19 583 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 AURKAO14965 403 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 NVLO15381 856 aaKnown RBP9□□□□□ -0.97
SMC1A-203ENST00000428014 KIF5CO60282 957 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 PRAMEF1O95521 474 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 METTL18O95568 372 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 ASMTLO95671 621 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 ECEL1O95672 775 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 AGTP01019 485 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 FGGP02679 453 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 MLNP12872 115 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 TCP1P17987 556 aaKnown RBP9□□□□□ -0.97
SMC1A-203ENST00000428014 ADRA1DP25100 572 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CHRNA4P43681 627 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CD151P48509 253 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 FNTAP49354 379 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 PRLHRP49683 370 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms