RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 ZDHHC20Q5W0Z9 365 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TRAPPC5Q8IUR0 188 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LSMEM2Q8N112 164 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 WDR36Q8NI36 951 aaKnown RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SLC35B2Q8TB61 432 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FGF11Q92914 225 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NAF1Q96HR8 494 aaKnown RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TMEM74Q96NL1 305 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PPP1R2P1Q96PQ5 205 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 VPS35Q96QK1 796 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TBL1YQ9BQ87 522 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NUDT22Q9BRQ3 303 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TMEM121Q9BTD3 319 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 STRADBQ9C0K7 418 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TRIM39Q9HCM9 518 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ASCL3Q9NQ33 180 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 THSD1Q9NS62 852 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KLC4Q9NSK0 619 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KCNK4Q9NYG8 393 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 IL17CQ9P0M4 197 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TMPRSS11EQ9UL52 423 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 AAR2Q9Y312 384 aaKnown RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LOXL2Q9Y4K0 774 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 A0A087WV48 116 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 A6NCN8 305 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 C5orf60A6NFR6 353 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 C2orf81A6NN90 581 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PDZK1P1A8MUH7 402 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TMX2-CTNND1H3BSU7 103 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PLD2O14939 933 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PPM1DO15297 605 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 B4GAT1O43505 415 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 VEGFDO43915 354 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A9O60656 530 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CDK14O94921 469 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TNFSF15O95150 251 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 METTL18O95568 372 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CPNE6O95741 557 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 HGFP14210 728 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A6P19224 532 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A1P22309 533 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A4P22310 534 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ITPKBP27987 946 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 AKT1P31749 480 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCKBRP32239 447 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A3P35503 534 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A5P35504 534 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 EIF2S3P41091 472 aaKnown RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 MAPK9P45984 424 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 HHEXQ03014 270 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 EIF3IQ13347 325 aaKnown RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NFATC2Q13469 925 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NR1D2Q14995 579 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TAF1AQ15573 450 aaPredicted RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SEPT7Q16181 437 aaKnown RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 P3H1Q32P28 736 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GPRC6AQ5T6X5 926 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RANBP10Q6VN20 620 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRRC69Q6ZNQ3 347 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 USP53Q70EK8 1073 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RAB11FIP2Q7L804 512 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TMPRSS9Q7Z410 1059 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRRTM4Q86VH4 590 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SLC13A5Q86YT5 568 aaPredicted RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNF547Q8IVP9 402 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRRC8AQ8IWT6 810 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SFRP1Q8N474 314 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FBXO39Q8N4B4 442 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 OR4K2Q8NGD2 314 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 C1orf54Q8WWF1 131 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRRC45Q96CN5 670 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LIN37Q96GY3 246 aaPredicted RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CRELD1Q96HD1 420 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNF578Q96N58 590 aaPredicted RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TTC25Q96NG3 672 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SLC38A3Q99624 504 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZCCHC2Q9C0B9 1178 aaKnown RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SEMA6CQ9H3T2 930 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 STN1Q9H668 368 aaKnown RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PRDM8Q9NQV8 689 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SMOXQ9NWM0 555 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PIH1D1Q9NWS0 290 aaKnown RBP9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PISDQ9UG56 409 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FKBPLQ9UIM3 349 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KCTD3Q9Y597 815 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PCDHGA8Q9Y5G5 932 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ANKRD36A6QL64 1941 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PLXNB3Q9ULL4 1909 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ACACAQ13085 2346 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LRRK1Q38SD2 2015 aa9.09□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PTPRBP23467 1997 aa9.08□□□□□ -0.96
RFX3-AS1-202ENST00000427722 IGHV1OR21-1A0A087WYE8 117 aa9.08□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CCL22O00626 93 aa9.08□□□□□ -0.96
RFX3-AS1-202ENST00000427722 GAPDHSO14556 408 aaPredicted RBP9.08□□□□□ -0.96
RFX3-AS1-202ENST00000427722 CHUKO15111 745 aa9.08□□□□□ -0.96
RFX3-AS1-202ENST00000427722 KMOO15229 486 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms