RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 GSTA3Q16772 222 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 Q75L30 129 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 SCML4Q8N228 414 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 PAF1Q8N7H5 531 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 SPATA5Q8NB90 893 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 MPHOSPH6Q99547 160 aaKnown RBP4.14□□□□□ -1.75
LINC01040-201ENST00000425048 SIL1Q9H173 461 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 ZNF71Q9NQZ8 489 aaPredicted RBP4.14□□□□□ -1.75
LINC01040-201ENST00000425048 PLCXD1Q9NUJ7 323 aa4.14□□□□□ -1.75
LINC01040-201ENST00000425048 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 FAM237AA0A1B0GTK4 181 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 C15orf62A8K5M9 175 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 NADKO95544 446 aaPredicted RBP4.13□□□□□ -1.75
LINC01040-201ENST00000425048 TPOP07202 933 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 KRT19P08727 400 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 ACADSP16219 412 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 CEBPBP17676 345 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 CCR5P51681 352 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 GTDC1Q4AE62 458 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 XKR6Q5GH73 641 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 TCTEX1D4Q5JR98 221 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 KIF1BPQ96EK5 621 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 RTP3Q9BQQ7 232 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 RHNO1Q9BSD3 238 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 FGFBP2Q9BYJ0 223 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 PRR34Q9NV39 138 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 PTTG2Q9NZH5 202 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 DNAJB4Q9UDY4 337 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 HAO1Q9UJM8 370 aa4.13□□□□□ -1.75
LINC01040-201ENST00000425048 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 TSPAN4O14817 238 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 LIPFP07098 398 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 ZNF182P17025 639 aaPredicted RBP4.12□□□□□ -1.75
LINC01040-201ENST00000425048 DCTN2Q13561 401 aaKnown RBP4.12□□□□□ -1.75
LINC01040-201ENST00000425048 ALG11Q2TAA5 492 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 LCN10Q6JVE6 187 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 PWWP2BQ6NUJ5 590 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 ZNF774Q6NX45 483 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 DOK6Q6PKX4 331 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 CDC20BQ86Y33 519 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 OR14L1PQ8NHC6 308 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 PPP4R1Q8TF05 950 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 GIMAP5Q96F15 307 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 TMEM68Q96MH6 324 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 PRKRIP1Q9H875 184 aaPredicted RBP4.12□□□□□ -1.75
LINC01040-201ENST00000425048 KIF9Q9HAQ2 790 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 SLC28A3Q9HAS3 691 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 BRF2Q9HAW0 419 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 KCND2Q9NZV8 630 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 TP53TG3Q9ULZ0 132 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 CSAG2Q9Y5P2 127 aa4.12□□□□□ -1.75
LINC01040-201ENST00000425048 PCNX3Q9H6A9 2034 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 A0A087WW49 117 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 NBNO60934 754 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 WISP2O76076 250 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 MLYCDO95822 493 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 ANXA7P20073 488 aaKnown RBP4.11□□□□□ -1.75
LINC01040-201ENST00000425048 CPOXP36551 454 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 WNT5AP41221 380 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 CCR10P46092 362 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 SLC6A12P48065 614 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 TBX2Q13207 712 aaPredicted RBP4.11□□□□□ -1.75
LINC01040-201ENST00000425048 ENPP2Q13822 863 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 PDE1CQ14123 709 aaPredicted RBP4.11□□□□□ -1.75
LINC01040-201ENST00000425048 ATG9AQ7Z3C6 839 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 HERVK_113Q902F9 699 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 ZBTB10Q96DT7 871 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 RRNAD1Q96FB5 475 aaKnown RBP4.11□□□□□ -1.75
LINC01040-201ENST00000425048 PKP2Q99959 881 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 SLX1AQ9BQ83 275 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 SYT15Q9BQS2 421 aa4.11□□□□□ -1.75
LINC01040-201ENST00000425048 A0A1W2PQM1 296 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 SNAP23O00161 211 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 MOCS3O95396 460 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 EDN1P05305 212 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 DNAH10OSP0CZ25 163 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 OLIG2Q13516 323 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 CTU2Q2VPK5 515 aaKnown RBP4.1□□□□□ -1.75
LINC01040-201ENST00000425048 GSTA5Q7RTV2 222 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 CPOQ8IVL8 374 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 SLC5A8Q8N695 610 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 TMEM143Q96AN5 459 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 APOPT1Q96IL0 206 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 FOXN4Q96NZ1 517 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 SEMA3CQ99985 751 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 GPR63Q9BZJ6 419 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 UBA2Q9UBT2 640 aaPredicted RBP4.1□□□□□ -1.75
LINC01040-201ENST00000425048 STK39Q9UEW8 545 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 YIPF1Q9Y548 306 aa4.1□□□□□ -1.75
LINC01040-201ENST00000425048 EIF4E1BA6NMX2 242 aaKnown RBP4.09□□□□□ -1.75
LINC01040-201ENST00000425048 A8MU10 97 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 LDLRAD4O15165 306 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 TRMUO75648 421 aaKnown RBP4.09□□□□□ -1.75
LINC01040-201ENST00000425048 AP2A2O94973 939 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 BMP10O95393 424 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 TRIM49P0CI25 452 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 TRIM49CP0CI26 452 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 NFKBIAP25963 317 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 EPHA2P29317 976 aa4.09□□□□□ -1.75
LINC01040-201ENST00000425048 TRAPPC10P48553 1259 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms