RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 LRRTM4Q86VH4 590 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 MPP5Q8N3R9 675 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 FAM46DQ8NEK8 389 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 HEXDCQ8WVB3 486 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 ZNF514Q96K75 400 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-205ENST00000423941 TIMM29Q9BSF4 260 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 TRIM51Q9BSJ1 452 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 ZCCHC2Q9C0B9 1178 aaKnown RBP18.21■□□□□ 0.51
HDAC6-205ENST00000423941 FAM96AQ9H5X1 160 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 ZDHHC3Q9NYG2 299 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 APOBEC2Q9Y235 224 aaKnown RBP18.21■□□□□ 0.51
HDAC6-205ENST00000423941 MRFAP1Q9Y605 127 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 PIKFYVEQ9Y2I7 2098 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 PTPRBP23467 1997 aa18.21■□□□□ 0.5
HDAC6-205ENST00000423941 FAM237BA0A1B0GVD1 139 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 CCDC78A2IDD5 438 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 KCNJ13O60928 360 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 SEC31AO94979 1220 aaKnown RBP18.2■□□□□ 0.5
HDAC6-205ENST00000423941 GOT2P00505 430 aaKnown RBP18.2■□□□□ 0.5
HDAC6-205ENST00000423941 GP1BAP07359 652 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 PRSS56P0CW18 603 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 CDK4P11802 303 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 ZNF7P17097 686 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-205ENST00000423941 ARNTP27540 789 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 DUSP3P51452 185 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-205ENST00000423941 CTSCP53634 463 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 TERF1P54274 439 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 C2orf54Q08AI8 447 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 DMPKQ09013 629 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 BCL7AQ4VC05 210 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 IZUMO3Q5VZ72 239 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 SERPINA9Q86WD7 417 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 NAGSQ8N159 534 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 ARL10Q8N8L6 244 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 OR4L1Q8NH43 312 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 GDAP1Q8TB36 358 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 ADAMTS14Q8WXS8 1223 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 MFSD3Q96ES6 412 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 CCDC97Q96F63 343 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-205ENST00000423941 LINC00615Q96LM1 132 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-205ENST00000423941 ERP44Q9BS26 406 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 GULP1Q9UBP9 304 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 CRLS1Q9UJA2 301 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 DOLKQ9UPQ8 538 aa18.2■□□□□ 0.5
HDAC6-205ENST00000423941 OR51F1A6NGY5 319 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 GOLGA8MH3BSY2 632 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 RAD51CO43502 376 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 ADRB1P08588 477 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 MYF5P13349 255 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 ACTR1BP42025 376 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 RP1P56715 2156 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 ACTR1AP61163 376 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 CKAP4Q07065 602 aaKnown RBP18.19■□□□□ 0.5
HDAC6-205ENST00000423941 HLTFQ14527 1009 aaKnown RBP eCLIP18.19■□□□□ 0.5
HDAC6-205ENST00000423941 ITIH4Q14624 930 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 NR0B2Q15466 257 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 TCEA2Q15560 299 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 DBN1Q16643 649 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 ZRANB3Q5FWF4 1079 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 DUPD1Q68J44 220 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 TMEM220Q6QAJ8 160 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 AFTPHQ6ULP2 937 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 RAB44Q7Z6P3 723 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-205ENST00000423941 SFTPA2Q8IWL1 248 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 KIF18AQ8NI77 898 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 GLMNQ92990 594 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 SNF8Q96H20 258 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 TTC25Q96NG3 672 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 COPS8Q99627 209 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 PADI4Q9UM07 663 aa18.19■□□□□ 0.5
HDAC6-205ENST00000423941 COL27A1Q8IZC6 1860 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-205ENST00000423941 KLHL33A6NCF5 533 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 EFCAB8A8MWE9 144 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 EML2O95834 649 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 ACP5P13686 325 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 ATP1B2P14415 290 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-205ENST00000423941 MSH3P20585 1137 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 RPL21P46778 160 aaKnown RBP18.18■□□□□ 0.5
HDAC6-205ENST00000423941 ARCN1P48444 511 aaKnown RBP18.18■□□□□ 0.5
HDAC6-205ENST00000423941 RPIAP49247 311 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 GTF2H3Q13889 308 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 ZNF658BQ4V348 819 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-205ENST00000423941 FNBP1LQ5T0N5 605 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 LYPLAL1Q5VWZ2 237 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 KIAA0930Q6ICG6 404 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-205ENST00000423941 SLC30A9Q6PML9 568 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 XKR5Q6UX68 686 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 WASH2PQ6VEQ5 465 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 PACS1Q6VY07 963 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 CERS6Q6ZMG9 384 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 KYQ8NBH2 561 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 ZNF592Q92610 1267 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 SGF29Q96ES7 293 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 FCRL3Q96P31 734 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-205ENST00000423941 DPEP2Q9H4A9 486 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 WASH6PQ9NQA3 447 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 EVA1BQ9NVM1 165 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 TBC1D29Q9UFV1 150 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 KCNK6Q9Y257 313 aa18.18■□□□□ 0.5
HDAC6-205ENST00000423941 ZCWPW2A0A1B0GU75 182 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms