RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 TGM4P49221 684 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 EMX1Q04741 257 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF273Q14593 569 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CCDC142Q17RM4 750 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 USP39Q53GS9 565 aaKnown RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 RGMBQ6NW40 437 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 HHIPL2Q6UWX4 724 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 MAMDC4Q6UXC1 1216 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 GALNT5Q7Z7M9 940 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 STX12Q86Y82 276 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 RNF135Q8IUD6 432 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLC44A2Q8IWA5 706 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CDH26Q8IXH8 852 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLFN12Q8IYM2 578 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 MPP5Q8N3R9 675 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 WDR36Q8NI36 951 aaKnown RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 RDH11Q8TC12 318 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 RNF170Q96K19 258 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 RIPOR3Q96MK2 946 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLC9A7Q96T83 725 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SORT1Q99523 831 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ABCB9Q9NP78 766 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 MCUBQ9NWR8 336 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 DTLQ9NZJ0 730 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF639Q9UID6 485 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 NENFQ9UMX5 172 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 PDE10AQ9Y233 779 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 PRELID3BQ9Y3B1 194 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 TRPM2O94759 1503 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 A0A1W2PP18 115 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 TPP1O14773 563 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SCAMP1O15126 338 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 MPOP05164 745 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLC10A3P09131 477 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 HOXB3P14651 431 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLC7A1P30825 629 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 HTR7P34969 479 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 GP5P40197 560 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 NNMTP40261 264 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 POU3F4P49335 361 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CSNK2BP67870 215 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 INCA1Q0VD86 236 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CDH18Q13634 790 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SEC23BQ15437 767 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SMN1Q16637 294 aaKnown RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 PARP15Q460N3 678 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 MPP7Q5T2T1 576 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 MBLAC2Q68D91 279 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 BHLHB9Q6PI77 547 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 RBMS3Q6XE24 437 aaKnown RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 USP51Q70EK9 711 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 TMC8Q8IU68 726 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 TMEM132CQ8N3T6 1108 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 STPG2Q8N412 459 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 PLPP7Q8NBV4 271 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 OR4D10Q8NGI6 311 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ACTL9Q8TC94 416 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLC22A17Q8WUG5 538 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 TFAP2BQ92481 460 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 FAM167AQ96KS9 214 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CHCHD6Q9BRQ6 235 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CRB3Q9BUF7 120 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 STRA6Q9BX79 667 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLIRPQ9GZT3 109 aaKnown RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF385DQ9H6B1 395 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 GSN-AS1Q9NRJ2 163 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 RAB20Q9NX57 234 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLC6A14Q9UN76 642 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 USP22Q9UPT9 525 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF99A8MXY4 864 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 ALDH1A1P00352 501 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 ERVK-10P10266 1014 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 TSPAN8P19075 237 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 MYL9P24844 172 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 TYK2P29597 1187 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 GKP32189 559 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 RPL22P35268 128 aaKnown RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 NUP62P37198 522 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 DDOSTP39656 456 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 GMPSP49915 693 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 HNMTP50135 292 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 GHRHRQ02643 423 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 SIM2Q14190 667 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 STARD3Q14849 445 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 CLCA4Q14CN2 919 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 SYDE1Q6ZW31 735 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 COLGALT2Q8IYK4 626 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 MYCT1Q8N699 235 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF680Q8NEM1 530 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 OR10Q1Q8NGQ4 319 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 OR52N1Q8NH53 320 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 PNPT1Q8TCS8 783 aaKnown RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 MCOLN3Q8TDD5 553 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 ATOH1Q92858 354 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 FAF2Q96CS3 445 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 ASB9Q96DX5 294 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 GPR63Q9BZJ6 419 aa6.79□□□□□ -1.32
CNOT4-205ENST00000423368 EXOSC4Q9NPD3 245 aaKnown RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 NGRNQ9NPE2 291 aaKnown RBP6.79□□□□□ -1.32
CNOT4-205ENST00000423368 RAB6BQ9NRW1 208 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms