RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 VWC2LB2RUY7 222 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 K7ENM7 598 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 KIAA0391O15091 583 aaKnown RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 HCRTO43612 131 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 FAM189A1O60320 539 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 TLR5O60602 858 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ATP2C2O75185 946 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 LDHAP00338 332 aaKnown RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 LIPCP11150 499 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 PPP3CBP16298 524 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 CDC25AP30304 524 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 GALCP54803 685 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 EVCP57679 992 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 SESN3P58005 492 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 RPS14P62263 151 aaKnown RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 RBP5P82980 135 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 OVGP1Q12889 678 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 KLF1Q13351 362 aaPredicted RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 MORC3Q14149 939 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ZRSR1Q15695 479 aaKnown RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 KRTAP21-3Q3LHN1 58 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 MINDY4Q4G0A6 757 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 MDH1BQ5I0G3 518 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 PXDC1Q5TGL8 231 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ZNF776Q68DI1 518 aaPredicted RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 C1orf186Q6ZWK4 172 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 DSG4Q86SJ6 1040 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 PRPF39Q86UA1 669 aaKnown RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 LRRC52Q8N7C0 313 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ZBTB8BQ8NAP8 495 aaPredicted RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 OR2T34Q8NGX1 318 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 OR4C6Q8NH72 309 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 IFI44Q8TCB0 444 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 DDI1Q8WTU0 396 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 SORCS1Q8WY21 1168 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 APOLD1Q96LR9 279 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ZNF700Q9H0M5 742 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 TMEM60Q9H2L4 133 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 SNX25Q9H3E2 840 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 SYNDIG1Q9H7V2 258 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 USP29Q9HBJ7 922 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 TLR8Q9NR97 1041 aaKnown RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 GJB4Q9NTQ9 266 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 GDAP2Q9NXN4 497 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 TUBA8Q9NY65 449 aaPredicted RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 NCKIPSDQ9NZQ3 722 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 KCND2Q9NZV8 630 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 SH3BP4Q9P0V3 963 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 SUN2Q9UH99 717 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 AGO2Q9UKV8 859 aaKnown RBP5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ITGA11Q9UKX5 1188 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ZNF510Q9Y2H8 683 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 BOD1L1Q8NFC6 3051 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 NBASA2RRP1 2371 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 RELNP78509 3460 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 MED13Q9UHV7 2174 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 ATP8B3O60423 1300 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3DA0A087WVF3 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3IA0A087WXS9 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3EA0A087X179 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3KA0A087X1G2 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 CPED1A4D0V7 1026 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3FA6NER0 549 aaPredicted RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 VSTM5A8MXK1 200 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3LB9A6J9 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TEX33O43247 280 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TCEA3O75764 348 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 RNASEH2AO75792 299 aaKnown RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 ATP5BP06576 529 aaKnown RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 TMEM191BP0C7N4 346 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3HP0C7X1 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 EBLN1P0CF75 366 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 NR2F6P10588 404 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 PF4V1P10720 104 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 DRD4P21917 467 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TGM2P21980 687 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 DGKAP23743 735 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 LMO2P25791 158 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 SLC5A2P31639 672 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 RECQLP46063 649 aaPredicted RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 HARS2P49590 506 aaKnown RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 POLE2P56282 527 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 CYP4F2P78329 520 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 POU5F1Q01860 360 aaKnown RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 EIF3IQ13347 325 aaKnown RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 CLCA4Q14CN2 919 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 POSTNQ15063 836 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TGIF1Q15583 401 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 SOWAHAQ2M3V2 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 SNX30Q5VWJ9 437 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3GQ6DHY5 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TBC1D3CQ6IPX1 549 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 NAPEPLDQ6IQ20 393 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 RUFY3Q7L099 469 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TADA2BQ86TJ2 420 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 IQCHQ86VS3 1027 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 HEATR4Q86WZ0 1026 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 CNGA4Q8IV77 575 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 DIS3L2Q8IYB7 885 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms