RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CYTH1Q15438 398 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 LRRC26Q2I0M4 334 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 TMCO2Q7Z6W1 182 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-206ENST00000421141 PLD3Q8IV08 490 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 UNC5BQ8IZJ1 945 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF366Q8N895 744 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF563Q8TA94 476 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 NKD2Q969F2 451 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-206ENST00000421141 TEKT5Q96M29 485 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 SMOQ99835 787 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 DPYSL5Q9BPU6 564 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 BRINP2Q9C0B6 783 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 RERGLQ9H628 205 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 CHRAC1Q9NRG0 131 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 GJD2Q9UKL4 321 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 RGS20O76081 388 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 PDHA1P08559 390 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 JMJD7P0C870 316 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 CYP4F2P78329 520 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 NFATC2Q13469 925 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 RUNX3Q13761 415 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 SQLEQ14534 574 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 CLLU1OSQ5K130 101 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TSTD2Q5T7W7 516 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 CASP12Q6UXS9 341 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 KIAA1143Q96AT1 154 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 DTLQ9NZJ0 730 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TPST1O60507 370 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ACP5P13686 325 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 C1DQ13901 141 aaKnown RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ZDHHC3Q9NYG2 299 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 PEX12O00623 359 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 SERPINB7O75635 380 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 OAZ2O95190 189 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 PAICSP22234 425 aaKnown RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 MLLT6P55198 1093 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 FBXO43Q4G163 708 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 PITRM1Q5JRX3 1037 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TMEM26Q6ZUK4 368 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 SPATA6LQ8N4H0 392 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ACSS3Q9H6R3 686 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 MTF2Q9Y483 593 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 PIAS3Q9Y6X2 628 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF831Q5JPB2 1677 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 MBLAC1A4D2B0 266 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 CAPN14A8MX76 684 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 KMOO15229 486 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 BANF1O75531 89 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 HLA-DQB2P05538 268 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 IL12BP29460 328 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 HOXA11P31270 313 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TBL3Q12788 808 aaKnown RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TDHQ8IZJ6 230 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 OR52L1Q8NGH7 329 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 PCDH19Q8TAB3 1148 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ALG3Q92685 438 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF576Q9H609 170 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 KLC4Q9NSK0 619 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 CEP290O15078 2479 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 DLEC1Q9Y238 1755 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 H3BN98 237 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TCF3P15923 654 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 NT5EP21589 574 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 SLC6A2P23975 617 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 HADHBP55084 474 aaKnown RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ACAP2Q15057 778 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 SAMD4BQ5PRF9 694 aaKnown RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 SLC36A4Q6YBV0 504 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 FAM3CQ92520 227 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TOP1MTQ969P6 601 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 NTRK1P04629 796 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 CCNYL3P0C7X3 344 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 HLA-EP13747 358 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 GNAZP19086 355 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 SERINC3Q13530 473 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 C16orf72Q14CZ0 275 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 TRIP10Q15642 601 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 RFTN2Q52LD8 501 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-206ENST00000421141 CPTPQ5TA50 214 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 RABEPKQ7Z6M1 372 aa10.64□□□□□ -0.71
PTCH1-206ENST00000421141 ADAMTSL1Q8N6G6 1762 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ANKRD66B4E2M5 251 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 OGNP20774 298 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 MAGEA9P43362 315 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 DEFB103AP81534 67 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 PRR5P85299 388 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 RUNX1T1Q06455 604 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SH3PXD2AQ5TCZ1 1133 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 PIWIL2Q8TC59 973 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ZDHHC12Q96GR4 267 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 KCND1Q9NSA2 647 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 IGSF9Q9P2J2 1179 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ACTL7BQ9Y614 415 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 TSPAN6O43657 245 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 RECQL5O94762 991 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 PON2Q15165 354 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms