RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SHBQ15464 509 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 TBCEQ15813 527 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 CCNG2Q16589 344 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 IMMTQ16891 758 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 RABL6Q3YEC7 729 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 DNAJC21Q5F1R6 531 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 BEND6Q5SZJ8 279 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 RESP18Q5W5W9 173 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 TYW3Q6IPR3 259 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 GBP6Q6ZN66 633 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 TMTC3Q6ZXV5 915 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 SHFQ7M4L6 423 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 GSTA5Q7RTV2 222 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CTAGE6Q86UF2 777 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 ZNF589Q86UQ0 364 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 TMEM139Q8IV31 216 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CTAGE4Q8IX94 777 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 C10orf67Q8IYJ2 551 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 AADATQ8N5Z0 425 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 SCCPDHQ8NBX0 429 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CNNM3Q8NE01 707 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 PPHLN1Q8NEY8 458 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 CCDC148Q8NFR7 591 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 BEST2Q8NFU1 509 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 B4GALNT2Q8NHY0 566 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 NCOA7Q8NI08 942 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 ERGIC1Q969X5 290 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 MIB2Q96AX9 1013 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 SKA1Q96BD8 255 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 PABPC5Q96DU9 382 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 TXNDC15Q96J42 360 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 NAPGQ99747 312 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 NCAPGQ9BPX3 1015 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 NTPCRQ9BSD7 190 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 MMTAG2Q9BU76 263 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 GLIS2Q9BZE0 524 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 PLEKHA4Q9H4M7 779 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 BICC1Q9H694 974 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 SLC6A13Q9NSD5 602 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 RAI14Q9P0K7 980 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 VPS18Q9P253 973 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 INTS6Q9UL03 887 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 JRKLQ9Y4A0 524 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 NFE2L3Q9Y4A8 694 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 LSM4Q9Y4Z0 139 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 CPDO75976 1380 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 NID2Q14112 1375 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 C5P01031 1676 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ZMYM6O95789 1325 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 NEDD4P46934 1319 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ATRNO75882 1429 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 MYO5AQ9Y4I1 1855 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 TRIP12Q14669 1992 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 TJP1Q07157 1748 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 NUP188Q5SRE5 1749 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 NWD2Q9ULI1 1742 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 A0A087X0M5 115 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 A0A1B0GX30 115 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 DYTNA2CJ06 578 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SRRM3A6NNA2 597 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 TMCO5BA8MYB1 307 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 IFNL4K9M1U5 179 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 WNT9BO14905 357 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 TIMM23O14925 209 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 RNF113AO15541 343 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 TGFB1I1O43294 461 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SHOX2O60902 331 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 SERPINI2O75830 405 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 CIAO1O76071 339 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 CCNDBP1O95273 360 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 VNN2O95498 520 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 GLUD1P00367 558 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 CLEC3BP05452 202 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 PRSS2P07478 247 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 HSPD1P10809 573 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 FDPSP14324 419 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 ZNF18P17022 549 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 GPTP24298 496 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 CHMP24386 653 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 PSMA4P25789 261 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 ICAM3P32942 547 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SHMT1P34896 483 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 BSGP35613 385 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 PIGAP37287 484 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 IL15P40933 162 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 GLUD2P49448 558 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 MMP14P50281 582 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 MXI1P50539 228 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 FOXG1P55316 489 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 RPS3AP61247 264 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 OLR1P78380 273 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 TMEM115Q12893 351 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 TRAF2Q12933 501 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 TRDNQ13061 729 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 FHL1Q13642 323 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 GCKRQ14397 625 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 FGFBP1Q14512 234 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 CASP8Q14790 479 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 RILPL1Q5EBL4 403 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SGO1Q5FBB7 561 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms