RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 LOC400499M0QZD8 3231 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 C2orf81A6NN90 581 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 CDRT15L2A8MXV6 281 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 CCL22O00626 93 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 KMOO15229 486 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 SRP72O76094 671 aaKnown RBP20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 PRAMEF1O95521 474 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 PTMAP06454 111 aaKnown RBP20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 ZSCAN5DPP0CG00 497 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 F3P13726 295 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 TPH1P17752 444 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 GRIA1P42261 906 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 TNNT3P45378 269 aaPredicted RBP20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 NFATC2Q13469 925 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 SEMA5AQ13591 1074 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 SNX1Q13596 522 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 CCNG2Q16589 344 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 C3orf38Q5JPI3 329 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 TAB3Q8N5C8 712 aaPredicted RBP20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 ZNF398Q8TD17 642 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 NAT14Q8WUY8 206 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 SLC46A1Q96NT5 459 aa20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 SARS2Q9NP81 518 aaKnown RBP20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 PIH1D1Q9NWS0 290 aaKnown RBP20.31■□□□□ 0.84
PKNOX1-202ENST00000418336 ZFYVE26Q68DK2 2539 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 ADAMTS20P59510 1910 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 CCDC187A0A096LP49 1063 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 TRBV5-4A0A0C4DH59 114 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 MROH6A6NGR9 719 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 RHPN2P1A8MT19 583 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 H7C0S8 307 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 FGGP02679 453 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 HOXB3P14651 431 aaPredicted RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 CXCR5P32302 372 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 INHBCP55103 352 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 DMPKQ09013 629 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 ITGA9Q13797 1035 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 KCTD19Q17RG1 926 aaPredicted RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 LDLRAP1Q5SW96 308 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 NKAIN2Q5VXU1 208 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 FAM83HQ6ZRV2 1179 aaPredicted RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 ZNF761Q86XN6 746 aaPredicted RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 RASGEF1CQ8N431 466 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 DNAJC1Q96KC8 554 aaKnown RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 ZNF578Q96N58 590 aaPredicted RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 SYNDIG1Q9H7V2 258 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 RDH14Q9HBH5 336 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 TMEM9Q9P0T7 183 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 ZNF624Q9P2J8 865 aaPredicted RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 DRG1Q9Y295 367 aaKnown RBP20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 NBEAQ8NFP9 2946 aa20.3■□□□□ 0.84
PKNOX1-202ENST00000418336 KIR2DS5A0A0G2JLQ3 304 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 A0A0G2JNG1 304 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 KIR2DS3K7RE56 304 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 CRTAMO95727 393 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 PRSS56P0CW18 603 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 RPL22P35268 128 aaKnown RBP20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 CDKN1CP49918 316 aaPredicted RBP20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 ERVPABLB-1P60509 514 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 KIR2DS5Q14953 304 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 CLPPQ16740 277 aaPredicted RBP20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 ZNF658BQ4V348 819 aaPredicted RBP20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 AGAP9Q5VTM2 703 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 ABRAXAS1Q6UWZ7 409 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 WASH2PQ6VEQ5 465 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 CLEC14AQ86T13 490 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 PRELID2Q8N945 189 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 WDR36Q8NI36 951 aaKnown RBP20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 FGF11Q92914 225 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 WASH6PQ9NQA3 447 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 NLE1Q9NVX2 485 aaPredicted RBP20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 PDP2Q9P2J9 529 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 ZNF148Q9UQR1 794 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 WDR37Q9Y2I8 494 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 ZKSCAN5Q9Y2L8 839 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 SSUH2Q9Y2M2 353 aa20.29■□□□□ 0.84
PKNOX1-202ENST00000418336 SMG1Q96Q15 3661 aaKnown RBP20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 IGLV3-16A0A075B6K0 115 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 IGHV5-10-1A0A0J9YXX1 117 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 SNX2O60749 519 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 CPNE6O95741 557 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 XRCC1P18887 633 aaPredicted RBP20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 ALDH4A1P30038 563 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 TMPRSS15P98073 1019 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 HHEXQ03014 270 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 C16orf72Q14CZ0 275 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 USP53Q70EK8 1073 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 OR52K1Q8NGK4 314 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 EPB41L5Q9HCM4 733 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 OGFRQ9NZT2 677 aa20.28■□□□□ 0.84
PKNOX1-202ENST00000418336 PRAMEF33A0A0G2JMD5 474 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 ERI2A8K979 691 aaKnown RBP20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 PSMD3O43242 534 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 IFNB1P01574 187 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 HGFP14210 728 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 FDFT1P37268 417 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 SLC19A1P41440 591 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 ARSDP51689 593 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 PDE1BQ01064 536 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 POU6F1Q14863 301 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms