RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PLD4Q96BZ4 506 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 HMCESQ96FZ2 354 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ABCB8Q9NUT2 735 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 A0A1B0GVM2 712 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 TCAF2A6NFQ2 919 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 BTN3A3O00478 584 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 TLX3O43711 291 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 B3GALT2O43825 422 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 NR2F6P10588 404 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ITGB5P18084 799 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 FAUP35544 74 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 NOMO3P69849 1222 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 TTC27Q6P3X3 843 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 TMEM220Q6QAJ8 160 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 TMPRSS11AQ6ZMR5 421 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 APOLD1Q96LR9 279 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 MFSD14AQ96MC6 490 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ARHGAP9Q9BRR9 750 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 CDH19Q9H159 772 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 FAM83DQ9H4H8 585 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 LDAHQ9H6V9 325 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 A0A1W2PQ72 361 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 CPED1A4D0V7 1026 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 MTHFRP42898 656 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 PRKCZQ05513 592 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 DMPKQ09013 629 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 RIPK1Q13546 671 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 TEX44Q53QW1 395 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 PLEKHG4Q58EX7 1191 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 CREG2Q8IUH2 290 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 C11orf49Q9H6J7 331 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ARHGEF4Q9NR80 690 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 SORCS3Q9UPU3 1222 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 SDK1Q7Z5N4 2213 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 A0A0J9YYE9 177 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 RIIAD1A6NNX1 92 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 DGKGP49619 791 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 TAS2R50P59544 299 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 RNASE12Q5GAN4 147 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 SPDYCQ5MJ68 293 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 NUP54Q7Z3B4 507 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 KAT2AQ92830 837 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 PCED1BQ96HM7 432 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 NPAS2Q99743 824 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 C9J4A7 227 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 WRBO00258 174 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 CASKO14936 926 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 INSIG1O15503 277 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 NDST3O95803 873 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 EOMESO95936 686 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 SNAPC1Q16533 368 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 COLEC12Q5KU26 742 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 RNASEH2BQ5TBB1 312 aaKnown RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 LDB1Q86U70 411 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 GBA3Q9H227 469 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 LHX5Q9H2C1 402 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 MRPS30Q9NP92 439 aaKnown RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 RGS17Q9UGC6 210 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 MED31Q9Y3C7 131 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 OAS3Q9Y6K5 1087 aaKnown RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 KLRG2A4D1S0 409 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 HDAC3O15379 428 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 B4GALT4O60513 344 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 RLN1P04808 185 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 SYN1P17600 705 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 AHCYP23526 432 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 GNA12Q03113 381 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 DLG2Q15700 870 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 KREMEN2Q8NCW0 462 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 PHC3Q8NDX5 983 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 ZMIZ2Q8NF64 920 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 SHDQ96IW2 340 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 TRIM2Q9C040 744 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 PCDH18Q9HCL0 1135 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 NOX1Q9Y5S8 564 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 CCDC162PA2VCL2 907 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 SEC24AO95486 1093 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 PRKAR1AP10644 381 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 BCAP31P51572 246 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 CHN2P52757 468 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 CHST4Q8NCG5 386 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 NKD1Q969G9 470 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 HEPHQ9BQS7 1158 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 OSBPL2Q9H1P3 480 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 DHRS7Q9Y394 339 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 CPQQ9Y646 472 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 SIN3BO75182 1162 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 CTSKP43235 329 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 TAS2R40P59535 323 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 GTF2H2Q13888 395 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 LDLRAP1Q5SW96 308 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 GCNT6Q5T4J0 391 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 GTF2H2CQ6P1K8 395 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 KCTD8Q6ZWB6 473 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms