RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SLC6A11P48066 632 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 RIPK1Q13546 671 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 E2F5Q15329 346 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 ATP13A5Q4VNC0 1218 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 FNDC3BQ53EP0 1204 aaKnown RBP16.6■□□□□ 0.25
SSBP3-205ENST00000417664 ANKS6Q68DC2 871 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 NUDT18Q6ZVK8 323 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 TREML1Q86YW5 311 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 OR8D1Q8WZ84 308 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 ELSPBP1Q96BH3 223 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 TIFAQ96CG3 184 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 CMTM5Q96DZ9 223 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 BOCQ9BWV1 1114 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 NUF2Q9BZD4 464 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 C1orf21Q9H246 121 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 FAM83DQ9H4H8 585 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 NUDT4Q9NZJ9 180 aa16.6■□□□□ 0.25
SSBP3-205ENST00000417664 NPEPPSL1A6NEC2 478 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 OTOL1A6NHN0 477 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 IQCF5A8MTL0 148 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 PRR5-ARHGAP8B1AHC4 643 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 H0Y858 1186 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 GYG2O15488 501 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 KRT16P08779 473 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 OR56A5P0C7T3 313 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 PSMC3P17980 439 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 NCF2P19878 526 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 INHBCP55103 352 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ARHGAP8P85298 464 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ELAVL3Q14576 367 aaKnown RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 GPRC6AQ5T6X5 926 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 TMPRSS6Q8IU80 811 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 NRSN1Q8IZ57 195 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 MYO1HQ8N1T3 1032 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 PHTF2Q8N3S3 785 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ZBTB2Q8N680 514 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 CEP70Q8NHQ1 597 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 EXT2Q93063 718 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 NXPE3Q969Y0 559 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ZSCAN5AQ9BUG6 496 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 APOL5Q9BWW9 433 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 MMADHCQ9H3L0 296 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 MEAF6Q9HAF1 191 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ACSS2Q9NR19 701 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 KLC4Q9NSK0 619 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 KCTD5Q9NXV2 234 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 TRAF6Q9Y4K3 522 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 CFAP99D6REC4 459 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 QSOX1O00391 747 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 SNX2O60749 519 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 MLYCDO95822 493 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ENO1P06733 434 aaKnown RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 RPS17P08708 135 aaKnown RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ENO3P13929 434 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ITGB7P26010 798 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 MMP12P39900 470 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 LCP2Q13094 533 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ADAM15Q13444 863 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 UBAP2LQ14157 1087 aaKnown RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 LSM12Q3MHD2 195 aaKnown RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 C9orf64Q5T6V5 341 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 FBXW10Q5XX13 1052 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 HOMEZQ8IX15 550 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 CLYBLQ8N0X4 340 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ARHGAP24Q8N264 748 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 TRAM1L1Q8N609 369 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 CPSF7Q8N684 471 aaKnown RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 TEX9Q8N6V9 391 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 ACTRT2Q8TDY3 377 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 PPP1R16AQ96I34 528 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 RIPOR3Q96MK2 946 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 OR52B2Q96RD2 323 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 SPATA16Q9BXB7 569 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 SHCBP1LQ9BZQ2 653 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 TMEM245Q9H330 911 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 TAS2R1Q9NYW7 299 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 TNPO3Q9Y5L0 923 aaKnown RBP16.59■□□□□ 0.25
SSBP3-205ENST00000417664 PRSS21Q9Y6M0 314 aa16.59■□□□□ 0.25
SSBP3-205ENST00000417664 RFXAPO00287 272 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 KPNA5O15131 536 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 LINC01565O15544 149 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 AP2A2O94973 939 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 TRIM16O95361 564 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 EPHA3P29320 983 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 BMP8BP34820 402 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 CA5AP35218 305 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 SEMG2Q02383 582 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 ELP6Q0PNE2 266 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 ZNF234Q14588 700 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 TGFBIQ15582 683 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 DNAL1Q4LDG9 190 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 HENMT1Q5T8I9 393 aaKnown RBP16.58■□□□□ 0.24
SSBP3-205ENST00000417664 DSG4Q86SJ6 1040 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 SPNS2Q8IVW8 549 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 CLDN19Q8N6F1 224 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 LMCD1Q9NZU5 365 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 SUN2Q9UH99 717 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 IKZF3Q9UKT9 509 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 PPM1HQ9ULR3 514 aa16.58■□□□□ 0.24
SSBP3-205ENST00000417664 TBC1D3BA6NDS4 549 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms