RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CST9Q5W186 159 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 ARHGAP17Q68EM7 881 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 ESRP1Q6NXG1 681 aaKnown RBP14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZBTB8OSQ8IWT0 167 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 DYNC2LI1Q8TCX1 351 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 NUP205Q92621 2012 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 KCNA7Q96RP8 456 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 AMBRA1Q9C0C7 1298 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 ALG9Q9H6U8 611 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 U3KQV3 271 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 SNAI1O95863 264 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 DBTP11182 482 aaKnown RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SULT1E1P49888 294 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 TRIP4Q15650 581 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 FBXO48Q5FWF7 155 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 ATAD3CQ5T2N8 411 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 ATF7IP2Q5U623 682 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 TAPT1Q6NXT6 567 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 CTU1Q7Z7A3 348 aaKnown RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 GALNT12Q8IXK2 581 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 ELMOD2Q8IZ81 293 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 BEND7Q8N7W2 519 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 NPLOC4Q8TAT6 608 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 FBXO30Q8TB52 745 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 STON2Q8WXE9 905 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SETD4Q9NVD3 440 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 INTS7Q9NVH2 962 aaKnown RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 PCDHA9Q9Y5H5 950 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 PCM1Q15154 2024 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 TBKBP1A7MCY6 615 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 CENPXA8MT69 81 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SSX4O60224 188 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 CYP2B6P20813 491 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 PRKACBP22694 351 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLC1A2P43004 574 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZNF157P51786 506 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 KPNA2P52292 529 aaKnown RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 ARHGAP1Q07960 439 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 UGP2Q16851 508 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 PAGE3Q5JUK9 113 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 BTBD8Q5XKL5 378 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 FAAH2Q6GMR7 532 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 BPHLQ86WA6 291 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 CADM2Q8N3J6 435 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SVOPQ8N4V2 548 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 LGALS12Q96DT0 336 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 PAQR5Q9NXK6 330 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLC2A6Q9UGQ3 507 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SCO2O43819 266 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 B4GALT4O60513 344 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 ALX3O95076 343 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 FTH1P02794 183 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 PCMT1P22061 227 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 KCNK10P57789 538 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 CHRNB3Q05901 458 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 CCL14Q16627 93 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 MPZL3Q6UWV2 235 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 ITFG1Q8TB96 612 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 MID1IP1Q9NPA3 183 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 NECTIN3Q9NQS3 549 aa14.59□□□□□ -0.07
NCKIPSD-204ENST00000416649 LINC00854A0A1B0GVQ3 168 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 LRRC14BA6NHZ5 514 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 ASB14A6NK59 587 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 JCHAINP01591 159 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 CYP4B1P13584 511 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SMPD1P17405 629 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 FOXA1P55317 472 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 CBX2Q14781 532 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SPRYD7Q5W111 196 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SCIMPQ6UWF3 145 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 LYPD8Q6UX82 237 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 BNIPLQ7Z465 357 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 PHF10Q8WUB8 498 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 MED30Q96HR3 178 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 RHNO1Q9BSD3 238 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SLIRPQ9GZT3 109 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 ATXN3LQ9H3M9 355 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 ERAP1Q9NZ08 941 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SATB2Q9UPW6 733 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 DNAJC15Q9Y5T4 150 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 USP3Q9Y6I4 520 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 CCDC154A6NI56 674 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 EEF2KO00418 725 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SIX3O95343 332 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 ANGPTL1O95841 491 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 UMPSP11172 480 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 HRH2P25021 359 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 EFNA5P52803 228 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 OR2B6P58173 313 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 DNAJB13P59910 316 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SYT16Q17RD7 645 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 OTOP3Q7RTS5 596 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 GALNT5Q7Z7M9 940 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 DCP1BQ8IZD4 617 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 METTL4Q8N3J2 472 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 GOLM1Q8NBJ4 401 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 SPATA22Q8NHS9 363 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 FRS2Q8WU20 508 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms