RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 VIPP01282 170 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 APOC2P02655 101 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 ITGB2P05107 769 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 HLA-DPA1P20036 260 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 MAPK9P45984 424 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 MARCKSL1P49006 195 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 ARSDP51689 593 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 COPS2P61201 443 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 TMEM115Q12893 351 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 GTF2H3Q13889 308 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 ATP13A5Q4VNC0 1218 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 SIRPB2Q5JXA9 342 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 DCAF12Q5T6F0 453 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 PLXDC1Q8IUK5 500 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 TTC30BQ8N4P2 665 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 SLC25A41Q8N5S1 370 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 GDAP1Q8TB36 358 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 KRT35Q92764 455 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 NKD1Q969G9 470 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 OXNAD1Q96HP4 312 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 TTC25Q96NG3 672 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 PANX2Q96RD6 677 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 FERMT1Q9BQL6 677 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 IL17CQ9P0M4 197 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 SCHIP1Q9P0W5 487 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 TMPRSS11EQ9UL52 423 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 TFR2Q9UP52 801 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 PCDHGA4Q9Y5G9 962 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 EPN1Q9Y6I3 576 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 H7C0C1 242 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 KCNJ13O60928 360 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 VCLP18206 1134 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 IDSP22304 550 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 SPAM1P38567 509 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 SLC19A1P41440 591 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 ATP5OP48047 213 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 MC2RQ01718 297 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 NOMO1Q15155 1222 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 SLC1A5Q15758 541 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 PLA2G4EQ3MJ16 856 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 CCDC181Q5TID7 509 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 ABRAXAS1Q6UWZ7 409 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 WASH2PQ6VEQ5 465 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 TMTC1Q8IUR5 882 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 ZNF547Q8IVP9 402 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 TRIM48Q8IWZ4 208 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 BMPERQ8N8U9 685 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 IPMKQ8NFU5 416 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 PMEPA1Q969W9 287 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 TBC1D10AQ9BXI6 508 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 HEMGNQ9BXL5 484 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 IL26Q9NPH9 171 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 WASH6PQ9NQA3 447 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 FBXO8Q9NRD0 319 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 RSPH14Q9UHP6 348 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 EFR3BQ9Y2G0 817 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 DNAJC16Q9Y2G8 782 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 PCDHA3Q9Y5H8 950 aa17.32■□□□□ 0.36
PDLIM2-208ENST00000416159 PRR19A6NJB7 356 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 PDZK1P1A8MUH7 402 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 F5H423 210 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 PPFIA2O75334 1257 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 ANXA9O76027 345 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 NDUFA10O95299 355 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 IPO7O95373 1038 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 PLA2G2AP14555 144 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 RBL1P28749 1068 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A3P35503 534 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 CHRNA4P43681 627 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 GEMP55040 296 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 LINC00303Q3SY05 128 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 KHDC1Q4VXA5 237 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 LDLRAP1Q5SW96 308 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 AGAP9Q5VTM2 703 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 ANKS6Q68DC2 871 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 ITPRIPL1Q6GPH6 555 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 CEACAM20Q6UY09 585 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 GLT6D1Q7Z4J2 308 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 IL22RA1Q8N6P7 574 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 BLOC1S5Q8TDH9 187 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 JPH3Q8WXH2 748 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 MRFAP1L1Q96HT8 127 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 ARHGAP9Q9BRR9 750 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 ZPBPQ9BS86 351 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 FSD1LQ9BXM9 530 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 ZCCHC2Q9C0B9 1178 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 POT1Q9NUX5 634 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 ZNF624Q9P2J8 865 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 PKP3Q9Y446 797 aa17.31■□□□□ 0.36
PDLIM2-208ENST00000416159 B8ZZF3 427 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 RAD1O60671 282 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 AMD1P17707 334 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 WT1P19544 449 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 CTNNA1P35221 906 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 CETN2P41208 172 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 ZNF75DP51815 510 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 NAP1L1P55209 391 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 ITGA9Q13797 1035 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 CHRNA6Q15825 494 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms