RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 PCDH20Q8N6Y1 951 aaKnown RBP13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 OR2AP1Q8NGE2 309 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 TWIST2Q8WVJ9 160 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 ULK4Q96C45 1275 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 ZNF641Q96N77 438 aaPredicted RBP13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 SLC22A12Q96S37 553 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 ZNF184Q99676 751 aaPredicted RBP13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 OSBPL1AQ9BXW6 950 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 CPEB1Q9BZB8 566 aaKnown RBP13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 P2RY12Q9H244 342 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 VCXQ9H320 206 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 BPIFA1Q9NP55 256 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 RAD18Q9NS91 495 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 GID8Q9NWU2 228 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 NMRK1Q9NWW6 199 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 EVLQ9UI08 416 aaPredicted RBP13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 CRLS1Q9UJA2 301 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 IRAK3Q9Y616 596 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 TRIOO75962 3097 aa13.36□□□□□ -0.27
SSR4P1-201ENST00000415143 C1orf232A0A0U1RR37 186 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 CAPN8A6NHC0 703 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 EIF3FO00303 357 aaPredicted RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 CFLARO15519 480 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PEX1O43933 1283 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PDE5AO76074 875 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 CDK14O94921 469 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 POP4O95707 220 aaKnown RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 ESRRBO95718 433 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 MTHFD2P13995 350 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 IDO1P14902 403 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PCSK2P16519 638 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 RECQLP46063 649 aaPredicted RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PSMD8P48556 350 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 MRPL19P49406 292 aaKnown RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PSME3P61289 254 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 HTRA4P83105 476 aaPredicted RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 KLC1Q07866 573 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 LMAN2Q12907 356 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 TRAP1Q12931 704 aaKnown RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 FLOT2Q14254 428 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PTK2BQ14289 1009 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 TSNQ15631 228 aaKnown RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 RBBP7Q16576 425 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 MYLK3Q32MK0 819 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PITRM1Q5JRX3 1037 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 SAMD4BQ5PRF9 694 aaKnown RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 TMEM198Q66K66 360 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 GAREM2Q75VX8 874 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 LYSMD3Q7Z3D4 306 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 DHDDSQ86SQ9 333 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 HPS6Q86YV9 775 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 CAMK1DQ8IU85 385 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 BBS7Q8IWZ6 715 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 DDIASQ8IXT1 998 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 PLPP6Q8IY26 295 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 APCDD1Q8J025 514 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 MIER2Q8N344 545 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 CD200R1Q8TD46 325 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 TRPC4APQ8TEL6 797 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 ZNF483Q8TF39 744 aaPredicted RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 FUBP1Q96AE4 644 aaKnown RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 ASIC4Q96FT7 647 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 LYSMD1Q96S90 227 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 HOPXQ9BPY8 73 aaPredicted RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 CORO1BQ9BR76 489 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 HGH1Q9BTY7 390 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 LRRC3Q9BY71 257 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 FAM126AQ9BYI3 521 aaPredicted RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 ASB8Q9H765 288 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 ACSS2Q9NR19 701 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 CROTQ9UKG9 612 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 SARDHQ9UL12 918 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 MTF2Q9Y483 593 aaPredicted RBP13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 TECTAO75443 2155 aa13.35□□□□□ -0.27
SSR4P1-201ENST00000415143 GLYATL1P3A0A0U1RQE8 302 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 DYTNA2CJ06 578 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 PABPN1LA6NDY0 278 aaKnown RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 NPEPPSL1A6NEC2 478 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 GRXCR2A6NFK2 248 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SLC9A3R1O14745 358 aaPredicted RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 MRASO14807 208 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 NRP2O60462 931 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 XYLBO75191 536 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 PRAMEF1O95521 474 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SPATA31D3P0C874 917 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CBSLP0DN79 551 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CTPS1P17812 591 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CBSP35520 551 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 NNMTP40261 264 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CDH13P55290 713 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SH3BP2P78314 561 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 UBE3AQ05086 875 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CCNIQ14094 377 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms