RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GTF2H2Q13888 395 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 WTAPQ15007 396 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMEM198Q66K66 360 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 GTF2H2CQ6P1K8 395 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 CFAP161Q6P656 301 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 CCDC190Q86UF4 302 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 EXOC3L1Q86VI1 746 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 ARID3BQ8IVW6 561 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 MAP7D3Q8IWC1 876 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 PM20D2Q8IYS1 436 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 DCP1BQ8IZD4 617 aaKnown RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 MUC20Q8N307 709 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 EMC1Q8N766 993 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 SECTM1Q8WVN6 248 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 RSRC1Q96IZ7 334 aaKnown RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 GFI1Q99684 422 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 SRSF8Q9BRL6 282 aaKnown RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 SYT17Q9BSW7 474 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 MAK16Q9BXY0 300 aaKnown RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 CSTL1Q9H114 145 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 CCDC68Q9H2F9 335 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 PAG1Q9NWQ8 432 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 WWOXQ9NZC7 414 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 DNAJB4Q9UDY4 337 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 THOC2Q8NI27 1593 aaKnown RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 TARBP1Q13395 1621 aaKnown RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 EEA1Q15075 1411 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZCWPW2A0A1B0GU75 182 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 A0A1W2PS18 150 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 CTAGE9A4FU28 777 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 ASPDHA6ND91 283 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 PRSS47A8MTI9 375 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 PRSS44E7EML9 344 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 K7ENM7 598 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 KCNK5O95279 499 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 CTAGE8P0CG41 777 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 FAM106CPP0CH98 169 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 CDH1P12830 882 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 PORP16435 677 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF23P17027 643 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 HRH2P25021 359 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 FUT6P51993 359 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 CTSCP53634 463 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 RPL36AP83881 106 aaKnown RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 CHAF1BQ13112 559 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMEM35AQ53FP2 167 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 FAM109BQ6ICB4 259 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMPRSS12Q86WS5 348 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 CTAGE4Q8IX94 777 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 UTP15Q8TED0 518 aaKnown RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 SLC38A5Q8WUX1 472 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMEM255BQ8WV15 326 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 SLC44A1Q8WWI5 657 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 NAF1Q96HR8 494 aaKnown RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 GAD1Q99259 594 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 NEURL2Q9BR09 285 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 FKRPQ9H9S5 495 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 WSB2Q9NYS7 404 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 ADD3Q9UEY8 706 aaKnown RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 DBNLQ9UJU6 430 aaKnown RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 POU2F3Q9UKI9 436 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 OR2W1Q9Y3N9 320 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 LRRIQ1Q96JM4 1722 aa3.69□□□□□ -1.82
HMGB1P11-201ENST00000413899 FGD5Q6ZNL6 1462 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 A0A1W2PQ09 198 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 hCG_1807616A0A1W2PRN6 198 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 LRRC72A6NJI9 287 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 KRTAP29-1A8MX34 341 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 B4DLN1 442 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNHIT1O43257 154 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 PLPP2O43688 288 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 BUD23O43709 281 aaKnown RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 WDR1O75083 606 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF217O75362 1048 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 GH2P01242 217 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 F7P08709 466 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 GM2AP17900 193 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 POLR2CP19387 275 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 DGKAP23743 735 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 SLC15A1P46059 708 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF132P52740 706 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 MRPL12P52815 198 aaKnown RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 PNLIPRP2P54317 469 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 MFAP4P55083 255 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 ISL1P61371 349 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 PITX1P78337 314 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 KRTAP1-1Q07627 177 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 KCNC3Q14003 757 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZRSR1Q15695 479 aaKnown RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF672Q499Z4 452 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 KLHL22Q53GT1 634 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 RILPL1Q5EBL4 403 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 GAGE2AQ6NT46 116 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 FOXL2NBQ6ZUU3 175 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 CEP97Q8IW35 865 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 SCYL3Q8IZE3 742 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 SLC5A8Q8N695 610 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms