RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 STK19P49842 368 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 PLK1P53350 603 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 IRF8Q02556 426 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 USF2Q15853 346 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 USP39Q53GS9 565 aaKnown RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 FBXW10Q5XX13 1052 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 APCDD1Q8J025 514 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 PTGR2Q8N8N7 351 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 FAM3CQ92520 227 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 CIDECQ96AQ7 238 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 HGH1Q9BTY7 390 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 POMKQ9H5K3 350 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 B4GALT6Q9UBX8 382 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 POLG2Q9UHN1 485 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 RABGEF1Q9UJ41 708 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 KCNE2Q9Y6J6 123 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 FAM92AA1XBS5 289 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TMEM114B3SHH9 223 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SKAP2O75563 359 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SLC6A4P31645 630 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 NRLP54845 237 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 PFKFB4Q16877 469 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TRNP1Q6NT89 227 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SZRD1Q7Z422 152 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TMPRSS6Q8IU80 811 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 KRT78Q8N1N4 520 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 GLIS1Q8NBF1 620 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SEC14L1Q92503 715 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ACOX2Q99424 681 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ARL5AQ9Y689 179 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TMEM265A0A087WTH1 108 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 CYP17A1P05093 508 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ALPIP09923 528 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 IGFBP6P24592 240 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 KCNK10P57789 538 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 PTK2BQ14289 1009 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SLC14A2Q15849 920 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ZNF655Q8N720 491 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 OSBPL10Q9BXB5 764 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TMEM120AQ9BXJ8 343 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TDRD1Q9BXT4 1180 aaKnown RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 UNKQ9C0B0 810 aaKnown RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 MID1IP1Q9NPA3 183 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 EMC3Q9P0I2 261 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 CD84Q9UIB8 345 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TEX264Q9Y6I9 313 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 A0A088AWK7 358 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 H0Y3Z8 333 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 FKBP6O75344 327 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SRCP12931 536 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ZNF10P21506 573 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 C5AR1P21730 350 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 IL10P22301 178 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ABRQ12979 859 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 INPP5AQ14642 412 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TAZQ16635 292 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 QPCTQ16769 361 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 TRMT5Q32P41 509 aaKnown RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-211ENST00000413186 LPCAT2Q7L5N7 544 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 RELL1Q8IUW5 271 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ICA1LQ8NDH6 482 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 OR13C4Q8NGS5 318 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 GPR21Q99679 349 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 MGME1Q9BQP7 344 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 ADA2Q9NZK5 511 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 XPR1Q9UBH6 696 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SPASTQ9UBP0 616 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 COLEC10Q9Y6Z7 277 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 RGSL1A5PLK6 1076 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 LAMP2P13473 410 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 OXTRP30559 389 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 MAT2AP31153 395 aaKnown RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 CRHR1P34998 444 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 GRIA1P42261 906 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 NAGLUP54802 743 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 AASDHQ4L235 1098 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 C6orf10Q5SRN2 563 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 LRRC66Q68CR7 880 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 C16orf46Q6P387 395 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 TMEM220Q6QAJ8 160 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 UBE2R2Q712K3 238 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 OR52K2Q8NGK3 314 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 RIN3Q8TB24 985 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 RNF217Q8TC41 542 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 GATAD2BQ8WXI9 593 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 SIGLEC10Q96LC7 697 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 PPP1R36Q96LQ0 422 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 QRFPRQ96P65 431 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 RANBP9Q96S59 729 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 RIOK2Q9BVS4 552 aaKnown RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 EFCAB1Q9HAE3 211 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 STON1Q9Y6Q2 735 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 A0A0J9YYE9 177 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 TCRBV7S3A2A0A539 114 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 IPO13O94829 963 aaKnown RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 CLDN7O95471 211 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms