RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 COPG2Q9UBF2 871 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 PCDHGB7Q9Y5F8 929 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 PCDHGA6Q9Y5G7 932 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 FAM169AQ9Y6X4 670 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 IGLV3-10A0A075B6K4 115 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 C21orf140B9A014 251 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 TTI1O43156 1089 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 MED7O43513 233 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 PHF2O75151 1096 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 MTA2O94776 668 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 TMCC1O94876 653 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 PIGNO95427 931 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 NADKO95544 446 aaPredicted RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 IGSF6O95976 241 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 FGGP02679 453 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 KRT5P13647 590 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 TNFAIP3P21580 790 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 CTNNA1P35221 906 aaKnown RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 PTGER4P35408 488 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 TRIM23P36406 574 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 MMP12P39900 470 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 ADCY8P40145 1251 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 MDH1P40925 334 aaKnown RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 MCCD1P59942 119 aaPredicted RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 RHOAP61586 193 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 RPS18P62269 152 aaKnown RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 ZNF844Q08AG5 666 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 NFATC2Q13469 925 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 TESK1Q15569 626 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 SEL1L2Q5TEA6 688 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 ZNF354CQ86Y25 554 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 DNAAF5Q86Y56 855 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 PAF1Q8N7H5 531 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 NETO2Q8NC67 525 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 C1orf74Q96LT6 269 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 TRIM51Q9BSJ1 452 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 AP1M1Q9BXS5 423 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 PHPT1Q9NRX4 125 aaPredicted RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 ASNSD1Q9NWL6 643 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 SIDT1Q9NXL6 827 aaKnown RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 ZNF212Q9UDV6 495 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 SUFUQ9UMX1 484 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 OSGIN2Q9Y236 505 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 ATP8A1Q9Y2Q0 1164 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 UTP11Q9Y3A2 253 aaKnown RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 COPG1Q9Y678 874 aaKnown RBP6.87□□□□□ -1.31
LSM8-202ENST00000411938 NFS1Q9Y697 457 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 CSMD2Q7Z408 3487 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 ANKRD36A6QL64 1941 aa6.87□□□□□ -1.31
LSM8-202ENST00000411938 CXorf51AA0A1B0GTR3 108 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 F5H423 210 aaPredicted RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 MYO1FO00160 1098 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 PMM2O15305 246 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 INSIG1O15503 277 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 DAPK3O43293 454 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 THAP12O43422 761 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 F9P00740 461 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 MT-ND3P03897 115 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 FUCA1P04066 466 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 CEACAM5P06731 702 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 MYCLP1P12525 358 aaPredicted RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 COX6B1P14854 86 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 TFE3P19532 575 aaPredicted RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 PTGIRP43119 386 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 SULT1E1P49888 294 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 EIF3BP55884 814 aaKnown RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 RPS15P62841 145 aaKnown RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 DEUP1Q05D60 604 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 CETN1Q12798 172 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 IL11RAQ14626 422 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 ACOX1Q15067 660 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 TRADDQ15628 312 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 ACBD5Q5T8D3 534 aaPredicted RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 OTUD1Q5VV17 481 aaPredicted RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 NAA35Q5VZE5 725 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 TTC19Q6DKK2 380 aaPredicted RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 PNCKQ6P2M8 343 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 HOOK3Q86VS8 718 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 NLRP14Q86W24 1093 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 ARHGEF19Q8IW93 802 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 PELI3Q8N2H9 469 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 UBL4BQ8N7F7 174 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 FDCSPQ8NFU4 85 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 LMO3Q8TAP4 145 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 SLC35G2Q8TBE7 412 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 SLC37A2Q8TED4 501 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 ZNF473Q8WTR7 871 aaKnown RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 PTCD2Q8WV60 388 aaKnown RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 UBLCP1Q8WVY7 318 aaPredicted RBP6.86□□□□□ -1.31
LSM8-202ENST00000411938 RUNDC3BQ96NL0 473 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 OR6C1Q96RD1 312 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 CPXM1Q96SM3 734 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 FMO2Q99518 471 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 AGPAT1Q99943 283 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 NUDT9Q9BW91 350 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 GPR87Q9BY21 358 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 TXLNGYQ9BZA5 131 aa6.86□□□□□ -1.31
LSM8-202ENST00000411938 ILKAPQ9H0C8 392 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms