RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 AAR2Q9Y312 384 aaKnown RBP17.46■□□□□ 0.39
LSM5-204ENST00000409909 PKP3Q9Y446 797 aa17.46■□□□□ 0.39
LSM5-204ENST00000409909 KCTD3Q9Y597 815 aa17.46■□□□□ 0.39
LSM5-204ENST00000409909 PCDHGA7Q9Y5G6 932 aa17.46■□□□□ 0.39
LSM5-204ENST00000409909 GLYATL1P3A0A0U1RQE8 302 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 C5orf60A6NFR6 353 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 JMJD7P0C870 316 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 MPSTP25325 297 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 LIMK2P53671 638 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 NFATC2Q13469 925 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 SPARCL1Q14515 664 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 SOWAHCQ53LP3 525 aaPredicted RBP17.45■□□□□ 0.38
LSM5-204ENST00000409909 LRRTM4Q86VH4 590 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 JAMLQ86YT9 394 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 KLHDC8BQ8IXV7 354 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 FAM71DQ8N9W8 422 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 OR4D9Q8NGE8 314 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 GDAP1Q8TB36 358 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 SLC35B2Q8TB61 432 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 CCDC74BQ96LY2 380 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 FCRL3Q96P31 734 aaPredicted RBP17.45■□□□□ 0.38
LSM5-204ENST00000409909 BBC3Q96PG8 261 aaPredicted RBP17.45■□□□□ 0.38
LSM5-204ENST00000409909 SLC38A3Q99624 504 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 CMKLR1Q99788 373 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 TIMM29Q9BSF4 260 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 OSGEPL1Q9H4B0 414 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.45■□□□□ 0.38
LSM5-204ENST00000409909 CPNE7Q9UBL6 633 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 DNAJC16Q9Y2G8 782 aa17.45■□□□□ 0.38
LSM5-204ENST00000409909 KIR2DS5A0A0G2JLQ3 304 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 A0A0G2JNG1 304 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 GOLGA6L9A6NEM1 432 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 KIR2DS3K7RE56 304 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 STX7O15400 261 aaKnown RBP17.44■□□□□ 0.38
LSM5-204ENST00000409909 PPFIA2O75334 1257 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
LSM5-204ENST00000409909 CCL4P13236 92 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 GDF10P55107 478 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 GSDMDP57764 484 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 UBE2IP63279 158 aaKnown RBP17.44■□□□□ 0.38
LSM5-204ENST00000409909 GPLD1P80108 840 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 PRPSAP1Q14558 356 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 KIR2DS5Q14953 304 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 TAF1AQ15573 450 aaPredicted RBP17.44■□□□□ 0.38
LSM5-204ENST00000409909 INSCQ1MX18 579 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 SLC9B2Q86UD5 537 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 RASGEF1AQ8N9B8 481 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 TTC13Q8NBP0 860 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 OR4K2Q8NGD2 314 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 CPNE5Q9HCH3 593 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 GUCA1BQ9UMX6 200 aa17.44■□□□□ 0.38
LSM5-204ENST00000409909 PRAMEF33A0A0G2JMD5 474 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 OR5K4A6NMS3 321 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 GOLGA6L6A8MZA4 724 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 NVLO15381 856 aaKnown RBP17.43■□□□□ 0.38
LSM5-204ENST00000409909 PRAMEF10O60809 474 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 METTL18O95568 372 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 THRAP10827 490 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 SLC2A4P14672 509 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 BRAFP15056 766 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 LPOP22079 712 aaPredicted RBP17.43■□□□□ 0.38
LSM5-204ENST00000409909 CTSCP53634 463 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 CXADRP78310 365 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 CLN3Q13286 438 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 GPRC6AQ5T6X5 926 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 KCTD11Q693B1 232 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 TMEM71Q6P5X7 295 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 TRAPPC5Q8IUR0 188 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 DDHD1Q8NEL9 900 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 OR10G6Q8NH81 332 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 ZNF398Q8TD17 642 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 BRSK1Q8TDC3 778 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 USP7Q93009 1102 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 CCDC97Q96F63 343 aaPredicted RBP17.43■□□□□ 0.38
LSM5-204ENST00000409909 TBL1YQ9BQ87 522 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 TMEM121Q9BTD3 319 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 ARNT2Q9HBZ2 717 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 ZNF624Q9P2J8 865 aaPredicted RBP17.43■□□□□ 0.38
LSM5-204ENST00000409909 PDP2Q9P2J9 529 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 ACSL6Q9UKU0 697 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 ATRXP46100 2492 aa17.43■□□□□ 0.38
LSM5-204ENST00000409909 ZNF106Q9H2Y7 1883 aaKnown RBP17.42■□□□□ 0.38
LSM5-204ENST00000409909 C2orf81A6NN90 581 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 C9orf172C9J069 976 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 HGSO14964 777 aaPredicted RBP17.42■□□□□ 0.38
LSM5-204ENST00000409909 FGF3P11487 239 aaPredicted RBP17.42■□□□□ 0.38
LSM5-204ENST00000409909 XRCC1P18887 633 aaPredicted RBP17.42■□□□□ 0.38
LSM5-204ENST00000409909 RPL10P27635 214 aaKnown RBP17.42■□□□□ 0.38
LSM5-204ENST00000409909 SLC19A1P41440 591 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 MAPK10P53779 464 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 TRA2AQ13595 282 aaKnown RBP eCLIP17.42■□□□□ 0.38
LSM5-204ENST00000409909 ITGA9Q13797 1035 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 SEPT7Q16181 437 aaKnown RBP17.42■□□□□ 0.38
LSM5-204ENST00000409909 PARP6Q2NL67 630 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 LDLRAP1Q5SW96 308 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 BROXQ5VW32 411 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 ARHGEF18Q6ZSZ5 1173 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 ATG4AQ8WYN0 398 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 SH3KBP1Q96B97 665 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 AHCYL2Q96HN2 611 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms