RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ACTR1BP42025 376 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 CLCNKAP51800 687 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 ACTR1AP61163 376 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 DAB2P98082 770 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 CACNG1Q06432 222 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 ZRANB3Q5FWF4 1079 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 IZUMO3Q5VZ72 239 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 LRRTM4Q86VH4 590 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 HOOK3Q86VS8 718 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 ARL10Q8N8L6 244 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 SGSM3Q96HU1 749 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 SIRPGQ9P1W8 387 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 WASF3Q9UPY6 502 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 APOBEC2Q9Y235 224 aaKnown RBP22.06■■□□□ 1.12
PTCD3-203ENST00000409783 PTPRBP23467 1997 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 KIF2AO00139 706 aaPredicted RBP22.05■■□□□ 1.12
PTCD3-203ENST00000409783 KMOO15229 486 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 URI1O94763 535 aaPredicted RBP22.05■■□□□ 1.12
PTCD3-203ENST00000409783 EML2O95834 649 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 GOT2P00505 430 aaKnown RBP22.05■■□□□ 1.12
PTCD3-203ENST00000409783 ZNF7P17097 686 aaPredicted RBP22.05■■□□□ 1.12
PTCD3-203ENST00000409783 ACRV1P26436 265 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 MRPS25P82663 173 aaKnown RBP22.05■■□□□ 1.12
PTCD3-203ENST00000409783 NR0B2Q15466 257 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 ARMC3Q5W041 872 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 GUSBP11Q6P575 273 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 SERPINA9Q86WD7 417 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 NAT14Q8WUY8 206 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 ADAMTS14Q8WXS8 1223 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 SIGLEC10Q96LC7 697 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 TIMM29Q9BSF4 260 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 ZCCHC2Q9C0B9 1178 aaKnown RBP22.05■■□□□ 1.12
PTCD3-203ENST00000409783 DPEP2Q9H4A9 486 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 ZDHHC3Q9NYG2 299 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 NCKIPSDQ9NZQ3 722 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 GULP1Q9UBP9 304 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 KCNK6Q9Y257 313 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 PIKFYVEQ9Y2I7 2098 aa22.05■■□□□ 1.12
PTCD3-203ENST00000409783 A6NCN8 305 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 RAD51CO43502 376 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 RFPL3O75679 317 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 MSH3P20585 1137 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 ARNTP27540 789 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 DUSP3P51452 185 aaPredicted RBP22.04■■□□□ 1.12
PTCD3-203ENST00000409783 ILKQ13418 452 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 GTF2H3Q13889 308 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 DBN1Q16643 649 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 TMEM220Q6QAJ8 160 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 AFTPHQ6ULP2 937 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 CES3Q6UWW8 571 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 RAB44Q7Z6P3 723 aaPredicted RBP22.04■■□□□ 1.12
PTCD3-203ENST00000409783 PCGF5Q86SE9 256 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 TRAPPC5Q8IUR0 188 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 NAGSQ8N159 534 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 PATE1Q8WXA2 126 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 ZNF592Q92610 1267 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 GLMNQ92990 594 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 MFSD3Q96ES6 412 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 SGF29Q96ES7 293 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 TTC25Q96NG3 672 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 COPS8Q99627 209 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 TBC1D29Q9UFV1 150 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 PADI4Q9UM07 663 aa22.04■■□□□ 1.12
PTCD3-203ENST00000409783 COL27A1Q8IZC6 1860 aaPredicted RBP22.03■■□□□ 1.12
PTCD3-203ENST00000409783 SDR42E2A6NKP2 422 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 OR2AG2A6NM03 316 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 B4DGG1 531 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 SEC31AO94979 1220 aaKnown RBP22.03■■□□□ 1.12
PTCD3-203ENST00000409783 PMLP29590 882 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 AKT1P31749 480 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 RPIAP49247 311 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 HLTFQ14527 1009 aaKnown RBP eCLIP22.03■■□□□ 1.12
PTCD3-203ENST00000409783 SEMA3AQ14563 771 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 WHAMMP3Q1A5X7 153 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 PLA2G4EQ3MJ16 856 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 PERM1Q5SV97 790 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 HIBCHQ6NVY1 386 aaPredicted RBP22.03■■□□□ 1.12
PTCD3-203ENST00000409783 TAS2R42Q7RTR8 314 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 OR4L1Q8NH43 312 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 ZDHHC1Q8WTX9 485 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 TRIM56Q9BRZ2 755 aaKnown RBP22.03■■□□□ 1.12
PTCD3-203ENST00000409783 KLC4Q9NSK0 619 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 NCOR2Q9Y618 2525 aa22.03■■□□□ 1.12
PTCD3-203ENST00000409783 FAM187AA6NFU0 413 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 TRIM16O95361 564 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 TOP3BO95985 862 aaKnown RBP22.02■■□□□ 1.12
PTCD3-203ENST00000409783 GP1BAP07359 652 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 MORF4L2Q15014 288 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 BCL7AQ4VC05 210 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 C14orf28Q4W4Y0 310 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 FNBP1LQ5T0N5 605 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 XKR5Q6UX68 686 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 DET1Q7L5Y6 550 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 EFL1Q7Z2Z2 1120 aaKnown RBP22.02■■□□□ 1.12
PTCD3-203ENST00000409783 OR6P1Q8NGX9 317 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 IFI44Q8TCB0 444 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 HEXDCQ8WVB3 486 aa22.02■■□□□ 1.12
PTCD3-203ENST00000409783 ZNF514Q96K75 400 aaPredicted RBP22.02■■□□□ 1.12
PTCD3-203ENST00000409783 MARCH4Q9P2E8 410 aaPredicted RBP22.02■■□□□ 1.12
PTCD3-203ENST00000409783 MRFAP1Q9Y605 127 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms