RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 IFI35P80217 286 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 TSHZ1Q6ZSZ6 1077 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 THAP5Q7Z6K1 395 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 UNC5BQ8IZJ1 945 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 COX18Q8N8Q8 333 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 WDR18Q9BV38 432 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 BCO2Q9BYV7 579 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 DHRS7Q9Y394 339 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 HACD1B0YJ81 288 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 FGF19O95750 216 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 JUPP14923 745 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CDC42P60953 191 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 RPL7AP62424 266 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CPTPQ5TA50 214 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CRYBG2Q8N1P7 616 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ZCCHC7Q8N3Z6 543 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ZBTB8BQ8NAP8 495 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 C11orf65Q8NCR3 313 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CD101Q93033 1021 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CERS2Q96G23 380 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 MAP3K14Q99558 947 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 OR51B6Q9H340 312 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM27Q9HBJ8 222 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ZDHHC9Q9Y397 364 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 PIK3C2BO00750 1634 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 OAZ2O95190 189 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SNU13P55769 128 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 IL18Q14116 193 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 LRRC32Q14392 662 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF460Q14592 562 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 INAVAQ3KP66 663 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 TXNDC8Q6A555 127 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 EXOC3L1Q86VI1 746 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 HDAC7Q8WUI4 952 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 EZH1Q92800 747 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SHDQ96IW2 340 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 OR2AG1Q9H205 316 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 TRIM39Q9HCM9 518 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 GTF2IRD1Q9UHL9 959 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 G3V2T6 193 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SDC3O75056 442 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 MLYCDO95822 493 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 HLA-EP13747 358 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 PRMT9Q6P2P2 845 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 TCEANCQ8N8B7 351 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 DENND6BQ8NEG7 585 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 OR4E2Q8NGC2 313 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 METTL7AQ9H8H3 244 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 PPCSQ9HAB8 311 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ADGRE2Q9UHX3 823 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 RIPK3Q9Y572 518 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 MYH9P35579 1960 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 MYH8P13535 1937 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 B3GALT2O43825 422 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 FAM155BO75949 473 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TBX18O95935 607 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 PGAM2P15259 253 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 IL7RP16871 459 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 AP2S1P53680 142 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 RAB10P61026 200 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 RBM39Q14498 530 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 LARS2Q15031 903 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 PDGFRLQ15198 375 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 PERM1Q5SV97 790 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SAMD3Q8N6K7 520 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ATXN7L1Q9ULK2 861 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM98Q9Y2Y6 226 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 FAM237BA0A1B0GVD1 139 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 GRXCR1A8MXD5 290 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CASKO14936 926 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 NDUFS4O43181 175 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 PRAMEF1O95521 474 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 UQCRC1P31930 480 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 RXRGP48443 463 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ENTPD1P49961 510 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SNAPC1Q16533 368 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CHRDL2Q6WN34 429 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SLC29A4Q7RTT9 530 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 DTNBP1Q96EV8 351 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 DKKL1Q9UK85 242 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ARL5AQ9Y689 179 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TFECO14948 347 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CYP1A2P05177 515 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 F7P08709 466 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 MXD1Q05195 221 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 VSIG10LQ86VR7 867 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM145Q8NBT3 493 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SH3RF2Q8TEC5 729 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ESAMQ96AP7 390 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 C1GALT1C1Q96EU7 318 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CNDP2Q96KP4 475 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 EHD4Q9H223 541 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 POLR3BQ9NW08 1133 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF226Q9NYT6 803 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ERGIC3Q9Y282 383 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 DRD4P21917 467 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 EPHA3P29320 983 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 BTN3A2P78410 334 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 MRPS5P82675 430 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms