RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 RNF175Q8N4F7 328 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 DTNBP1Q96EV8 351 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 OSBPL11Q9BXB4 747 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 OLA1Q9NTK5 396 aaKnown RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 WARS2Q9UGM6 360 aaKnown RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 HAS3O00219 553 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 HTRA2O43464 458 aaPredicted RBP13.27□□□□□ -0.29
COL6A2-204ENST00000409416 KPNA6O60684 536 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 H6PDO95479 791 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 AQP1P29972 269 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 ADSLP30566 484 aaPredicted RBP13.27□□□□□ -0.29
COL6A2-204ENST00000409416 NDST2P52849 883 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 KCNK10P57789 538 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 RPL38P63173 70 aaKnown RBP13.27□□□□□ -0.29
COL6A2-204ENST00000409416 PRKCQQ04759 706 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 GTF2H3Q13889 308 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 IHHQ14623 411 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 LYSMD3Q7Z3D4 306 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 CLEC4FQ8N1N0 589 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 OR52B6Q8NGF0 335 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 OR2T34Q8NGX1 318 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 OR2T3Q8NH03 318 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 AURKBQ96GD4 344 aaPredicted RBP13.27□□□□□ -0.29
COL6A2-204ENST00000409416 CDKN2AIPNLQ96HQ2 116 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 FBXL20Q96IG2 436 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 YME1L1Q96TA2 773 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 GSTO2Q9H4Y5 243 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 ZNF385DQ9H6B1 395 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 TREX1Q9NSU2 369 aa13.27□□□□□ -0.29
COL6A2-204ENST00000409416 PAIP2BQ9ULR5 123 aaKnown RBP13.27□□□□□ -0.29
COL6A2-204ENST00000409416 OR2AG2A6NM03 316 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 AZIN1O14977 448 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 CYBAP13498 195 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 YBX1P67809 324 aaKnown RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ACAP2Q15057 778 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 HECTD3Q5T447 861 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 GPR141Q7Z602 305 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 LSRQ86X29 649 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 GPSM1Q86YR5 675 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 LZTR1Q8N653 840 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 SLCO4A1Q96BD0 722 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 TSSK3Q96PN8 268 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ACAT2Q9BWD1 397 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 NOL6Q9H6R4 1146 aaKnown RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 DNAJC15Q9Y5T4 150 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 DGKBQ9Y6T7 804 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 A0A1W2PRU2 124 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 CA12O43570 354 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 VPS26AO75436 327 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 SLC7A1P30825 629 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 STT3AP46977 705 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ADARP55265 1226 aaKnown RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ADAM17P78536 824 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 C16orf72Q14CZ0 275 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 UNC50Q53HI1 259 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ZNF678Q5SXM1 525 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 HMBOX1Q6NT76 420 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 RFLNAQ6ZTI6 216 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 CLYBLQ8N0X4 340 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 OR13J1Q8NGT2 312 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 PGAP3Q96FM1 320 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 CAPNS2Q96L46 248 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 RNF38Q9H0F5 515 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 HIPK3Q9H422 1215 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ZNF696Q9H7X3 374 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 MEAF6Q9HAF1 191 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 POLR3HQ9Y535 204 aaPredicted RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 PCDHGA4Q9Y5G9 962 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 SLC38A8A6NNN8 435 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 NME4O00746 187 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 CAPN3P20807 821 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 IMPDH1P20839 514 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 OXTRP30559 389 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 PCBP1Q15365 356 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 BRMS1LQ5PSV4 323 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ANKS6Q68DC2 871 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 TMEM214Q6NUQ4 689 aaKnown RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ANKS3Q6ZW76 656 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 C11orf96Q7Z7L8 435 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 ISCA2Q86U28 154 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 PELI3Q8N2H9 469 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 NCSTNQ92542 709 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 HSPBAP1Q96EW2 488 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 MED8Q96G25 268 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 MYOCQ99972 504 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 CLPBQ9H078 707 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 DNMT3LQ9UJW3 386 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 TDRKHQ9Y2W6 561 aaKnown RBP13.26□□□□□ -0.29
COL6A2-204ENST00000409416 CPQQ9Y646 472 aa13.26□□□□□ -0.29
COL6A2-204ENST00000409416 SLC22A2O15244 555 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CLOCKO15516 846 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CLDN7O95471 211 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 UGT2B4P06133 528 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CDH2P19022 906 aaPredicted RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 FASP25445 335 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 UFM1P61960 85 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CMTM8Q8IZV2 173 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms