RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PRDM8Q9NQV8 689 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 SNX12Q9UMY4 172 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 DNAJC16Q9Y2G8 782 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 SLC30A1Q9Y6M5 507 aa17.69■□□□□ 0.42
PDLIM2-206ENST00000409141 MYLKQ15746 1914 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 PPM1DO15297 605 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 B4GAT1O43505 415 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 CAPNS1P04632 268 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 F3P13726 295 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 SLC2A4P14672 509 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 VCLP18206 1134 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 MC4RP32245 332 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 OR1D5P58170 312 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 BASP1P80723 227 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 B4GALNT1Q00973 533 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 TRIP13Q15645 432 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 SKIDA1Q1XH10 827 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 CCDC38Q502W7 563 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 TMEM220Q6QAJ8 160 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 ZNF438Q7Z4V0 828 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 SNX20Q7Z614 316 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 SLC37A2Q8TED4 501 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 ULK4Q96C45 1275 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 GRAMD1AQ96CP6 724 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 SMARCAL1Q9NZC9 954 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 ZMIZ1Q9ULJ6 1067 aa17.68■□□□□ 0.42
PDLIM2-206ENST00000409141 CCDC78A2IDD5 438 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 MROH6A6NGR9 719 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 OR2AG2A6NM03 316 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 POP7O75817 140 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 GPR3P46089 330 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 CTSCP53634 463 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 GNG11P61952 73 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 CCDC173Q0VFZ6 552 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 LAMB3Q13751 1172 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 RTP5Q14D33 572 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 AMZ1Q400G9 498 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 GPR33Q49SQ1 333 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 ZRANB3Q5FWF4 1079 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 TTC27Q6P3X3 843 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 DET1Q7L5Y6 550 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 C11orf96Q7Z7L8 435 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 ACTRT1Q8TDG2 376 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 DCUN1D1Q96GG9 259 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 ATXN7L3BQ96GX2 97 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 CDKN2AIPNLQ96HQ2 116 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 CASS4Q9NQ75 786 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 EIF2B3Q9NR50 452 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 ATXN7L1Q9ULK2 861 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 ENTPD2Q9Y5L3 495 aa17.67■□□□□ 0.42
PDLIM2-206ENST00000409141 KIR2DS5A0A0G2JLQ3 304 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 A0A0G2JNG1 304 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 HEATR9A2RTY3 570 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 A6NCN8 305 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 OR5K4A6NMS3 321 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 AGAP14A8MT82 685 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 D6RAR5 112 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 H7C0S8 307 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 KIR2DS3K7RE56 304 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 CES2O00748 559 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 ZNF185O15231 689 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 KCNJ13O60928 360 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 RALBP11234 206 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 IDSP22304 550 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 COILP38432 576 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 FASLGP48023 281 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 KIR2DS5Q14953 304 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 FNBP1LQ5T0N5 605 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 TAS2R42Q7RTR8 314 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 SLC9B2Q86UD5 537 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 AMZ2Q86W34 360 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 NXPE1Q8N323 547 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 SGF29Q96ES7 293 aa17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 ZNF514Q96K75 400 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 STN1Q9H668 368 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 DNMT3AQ9Y6K1 912 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-206ENST00000409141 PDZK1P1A8MUH7 402 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 KRT14P02533 472 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 MPOP05164 745 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 ADRA1DP25100 572 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 RPL10P27635 214 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 HHEXQ03014 270 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 NR1D2Q14995 579 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 SEPT7Q16181 437 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 CCDC137Q6PK04 289 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 USP53Q70EK8 1073 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 RANBP9Q96S59 729 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 SLC38A3Q99624 504 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 COPS8Q99627 209 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 FOXP3Q9BZS1 431 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 SARS2Q9NP81 518 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 KCNK4Q9NYG8 393 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 DKK4Q9UBT3 224 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 ZFC3H1O60293 1989 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 UNC13CQ8NB66 2214 aa17.65■□□□□ 0.42
PDLIM2-206ENST00000409141 GOLGA6L10A0A0M3HER8 536 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 CFAP99D6REC4 459 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 TMX2-CTNND1H3BSU7 103 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms