RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 NEUROG3Q9Y4Z2 214 aa12.83□□□□□ -0.36
SMARCB1-203ENST00000407082 ABCA7Q8IZY2 2146 aa12.83□□□□□ -0.36
SMARCB1-203ENST00000407082 FLNBO75369 2602 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 TYW5A2RUC4 315 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 KDELR3O43731 214 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 DLX3O60479 287 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 CCNT2O60583 730 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 TSPAN3O60637 253 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 ENTPD5O75356 428 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 ADH1CP00326 375 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 CYBBP04839 570 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 CYP17A1P05093 508 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 MMP2P08253 660 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 GLDCP23378 1020 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 ARNTP27540 789 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 SLC6A4P31645 630 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 CPA2P48052 419 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 PTDSS1P48651 473 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 GNA12Q03113 381 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 UBAP2LQ14157 1087 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 DMC1Q14565 340 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 RCN1Q15293 331 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 KHDC1Q4VXA5 237 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 USP39Q53GS9 565 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 SOWAHCQ53LP3 525 aaPredicted RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 ACSBG2Q5FVE4 666 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 ARL13AQ5H913 290 aaPredicted RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 RALGPS1Q5JS13 557 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 SIRPB2Q5JXA9 342 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 HECTD2Q5U5R9 776 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 ADGRG6Q86SQ4 1221 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 PDZD3Q86UT5 571 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 CENPLQ8N0S6 344 aaPredicted RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 CEP70Q8NHQ1 597 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 DDI1Q8WTU0 396 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 DNAJC9Q8WXX5 260 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 BHMTQ93088 406 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 TMA16Q96EY4 203 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 PRR11Q96HE9 360 aaPredicted RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 NAF1Q96HR8 494 aaKnown RBP12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 OMDQ99983 421 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 BBS2Q9BXC9 721 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 CCDC68Q9H2F9 335 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 PFDN4Q9NQP4 134 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 SLC2A6Q9UGQ3 507 aa12.82□□□□□ -0.36
SMARCB1-203ENST00000407082 EML5Q05BV3 1969 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CCDC78A2IDD5 438 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 C2orf81A6NN90 581 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 NEDD8-MDP1E9PL57 170 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 TK2O00142 265 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CD3EAPO15446 510 aaKnown RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 IPO13O94829 963 aaKnown RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 RHOCP08134 193 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 ADH5P11766 374 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 ATP6V1C1P21283 382 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 PPARGP37231 505 aaPredicted RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CLNS1AP54105 237 aaKnown RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CYLC2Q14093 348 aaPredicted RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CSHL1Q14406 222 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 SMAD1Q15797 465 aaKnown RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 MPPE1Q53F39 396 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 TECRLQ5HYJ1 363 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 NAPRTQ6XQN6 538 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 LRRC74BQ6ZQY2 392 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 KDELC2Q7Z4H8 507 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 MYLK4Q86YV6 388 aaPredicted RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 TMEM151AQ8N4L1 468 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CHCHD4Q8N4Q1 142 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CCNYL1Q8N7R7 359 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 HEXDCQ8WVB3 486 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 HDAC10Q969S8 669 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CHFRQ96EP1 664 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 GPR78Q96P69 363 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 PSKH2Q96QS6 385 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 P2RY13Q9BPV8 354 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 MGME1Q9BQP7 344 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 ADGRE3Q9BY15 652 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 CATSPERZQ9NTU4 200 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 PLK2Q9NYY3 685 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 NKX1-2Q9UD57 310 aaPredicted RBP12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 COMMD10Q9Y6G5 202 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 MYOFQ9NZM1 2061 aa12.81□□□□□ -0.36
SMARCB1-203ENST00000407082 NBEAQ8NFP9 2946 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 A0A1B0GVM2 712 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 TCAF2A6NFQ2 919 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 H0Y3Z8 333 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 GFRA2O00451 464 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 MAP3K13O43283 966 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 TBL1XO60907 577 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 PYGLP06737 847 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 RPSAP08865 295 aaKnown RBP12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CCDC166P0CW27 439 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 TYRP14679 529 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 IMPDH1P20839 514 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 DRD1P21728 446 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 GJA4P35212 333 aa12.8□□□□□ -0.36
SMARCB1-203ENST00000407082 CPOXP36551 454 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms