RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ALPPL2P10696 532 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 PRKCIP41743 596 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 GNPDA1P46926 289 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 NUP54Q7Z3B4 507 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 C2orf73Q8N5S3 287 aaPredicted RBP11.96□□□□□ -0.5
SMCR8-201ENST00000406438 SMURF2Q9HAU4 748 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 MOCS1Q9NZB8 636 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 FBXO5Q9UKT4 447 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 SLC35G6P0C7Q6 338 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 ITPKAP23677 461 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 CRHR1P34998 444 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 RPL5P46777 297 aaKnown RBP11.96□□□□□ -0.5
SMCR8-201ENST00000406438 ADAM8P78325 824 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 MTX3Q5HYI7 312 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 SLCO6A1Q86UG4 719 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 IL1RAPQ9NPH3 570 aa11.96□□□□□ -0.5
SMCR8-201ENST00000406438 AGLP35573 1532 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 RP1P56715 2156 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 RHPN2P1A8MT19 583 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 RGS10O43665 173 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 AP2A2O94973 939 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 DBIP07108 87 aaKnown RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 SPATA31D3P0C874 917 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 RPL7AP62424 266 aaKnown RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 LIPEQ05469 1076 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 SPATA31D4Q6ZUB0 917 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 STRADAQ7RTN6 431 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 VSIG10LQ86VR7 867 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ARMC10Q8N2F6 343 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 XAGE5Q8WWM1 108 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 PDP1Q9P0J1 537 aaPredicted RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 DEC1Q9P2X7 70 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 HMGXB4Q9UGU5 601 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CD247P20963 164 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 PAX7P23759 505 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CACNG1Q06432 222 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ART4Q93070 314 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 NKD1Q969G9 470 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ARSJQ5FYB0 599 aaPredicted RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 LCN1P1Q5VSP4 162 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CPSF7Q8N684 471 aaKnown RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 PIGXQ8TBF5 258 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 GBA3Q9H227 469 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 TPK1Q9H3S4 243 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 IFT80Q9P2H3 777 aaPredicted RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 AVPR1BP47901 424 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CLCN7P51798 805 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ZBTB2Q8N680 514 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ZNF615Q8N8J6 731 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 TMEM161BQ8NDZ6 487 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 IL25Q9H293 177 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 HBS1LQ9Y450 684 aaKnown RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 NOS1APO75052 506 aaPredicted RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 FABP3P05413 133 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 PCDH1Q08174 1060 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 YTHDF3Q7Z739 585 aaKnown RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CFAP97Q9P2B7 532 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 MEGF6O75095 1541 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CACNA1CQ13936 2221 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ALDH4A1P30038 563 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 TNFSF9P41273 254 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CBX3Q13185 183 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CUZD1Q86UP6 607 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 TTC29Q8NA56 475 aaPredicted RBP11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 CCDC115Q96NT0 180 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 TCF25Q9BQ70 676 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 ERVW-1Q9UQF0 538 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 PCDHGB5Q9Y5G0 923 aa11.95□□□□□ -0.5
SMCR8-201ENST00000406438 OR14I1A6ND48 311 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 BANF1O75531 89 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 PTX3P26022 381 aaPredicted RBP11.94□□□□□ -0.5
SMCR8-201ENST00000406438 SLC13A2Q13183 592 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 HEPACAMQ14CZ8 416 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 UNC5BQ8IZJ1 945 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 OR4K2Q8NGD2 314 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 MFSD14AQ96MC6 490 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 OSER1Q9NX31 292 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 ELOVL7A1L3X0 281 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 SPATA31C2B4DYI2 1134 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 TISP43B9A030 160 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 VARSP26640 1264 aaKnown RBP11.94□□□□□ -0.5
SMCR8-201ENST00000406438 HTR7P34969 479 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 GTF2H2Q13888 395 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 RNASE12Q5GAN4 147 aaKnown RBP11.94□□□□□ -0.5
SMCR8-201ENST00000406438 GTF2H2CQ6P1K8 395 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 MED28Q9H204 178 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 LHX5Q9H2C1 402 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 SMIM35A0A1B0GVV1 85 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 PRNPP04156 253 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 ECHS1P30084 290 aa11.94□□□□□ -0.5
SMCR8-201ENST00000406438 WNT3AP56704 352 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms