RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 ATP6AP2O75787 350 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 C8BP07358 591 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 LYNP07948 512 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 CLTBP09497 229 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 GABRR2P28476 465 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 CA8P35219 290 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 CLCN7P51798 805 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 KCNK10P57789 538 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 SNRPD1P62314 119 aaKnown RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 BNIP2Q12982 314 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 TTLL9Q3SXZ7 439 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 PDCD4Q53EL6 469 aaKnown RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 ATXN7L2Q5T6C5 722 aaPredicted RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 ZDHHC20Q5W0Z9 365 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 TXNDC8Q6A555 127 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 METTL2BQ6P1Q9 378 aaKnown RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 C8orf82Q6P1X6 216 aaPredicted RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 PAOXQ6QHF9 649 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 LYSMD3Q7Z3D4 306 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 DHFR2Q86XF0 187 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 CPNE9Q8IYJ1 553 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 CBARPQ8N350 705 aaPredicted RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 MINDY1Q8N5J2 469 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 GOLM1Q8NBJ4 401 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 FIBINQ8TAL6 211 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 GRIN3AQ8TCU5 1115 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 SH3RF2Q8TEC5 729 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 EEF1AKMT1Q8WVE0 214 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 UCMAQ8WVF2 138 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 PIH1D2Q8WWB5 315 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 SPDL1Q96EA4 605 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 ALG14Q96F25 216 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 DUS3LQ96G46 650 aaKnown RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 C3orf30Q96M34 536 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 TRAPPC9Q96Q05 1148 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 TUBGCP5Q96RT8 1024 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 FAM126AQ9BYI3 521 aaPredicted RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 FAM192AQ9GZU8 254 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 EBF3Q9H4W6 596 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 IL21Q9HBE4 155 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 ZNF334Q9HCZ1 680 aaPredicted RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 SARS2Q9NP81 518 aaKnown RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 SDR39U1Q9NRG7 319 aaPredicted RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 ABCB8Q9NUT2 735 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 CFAP97Q9P2B7 532 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 TMEM181Q9P2C4 612 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 SUN2Q9UH99 717 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 POLG2Q9UHN1 485 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 FNDC3AQ9Y2H6 1198 aaKnown RBP9.21□□□□□ -0.94
CBX1-203ENST00000402583 NUP205Q92621 2012 aa9.21□□□□□ -0.94
CBX1-203ENST00000402583 C15orf38-AP3S2A0A0A6YYH1 394 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 GLYATL1P3A0A0U1RQE8 302 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 C1orf232A0A0U1RR37 186 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 CAPN8A6NHC0 703 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 LRRC14BA6NHZ5 514 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 H0YJX3 145 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 IFRD1O00458 451 aaPredicted RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 TXNDC9O14530 226 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 TEX28O15482 410 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 HTRA2O43464 458 aaPredicted RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 DENRO43583 198 aaKnown RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 OR1I1O60431 355 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 BAIAP3O94812 1187 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 PRAMEF1O95521 474 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 TSPAN12O95859 305 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 MT-CO1P00395 513 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 MYCP01106 439 aaPredicted RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 NPPAP01160 153 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 TRBC1P01850 177 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 ALDOCP09972 364 aaKnown RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 LINC00032P0C843 101 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 NCF1P14598 390 aaPredicted RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 CTPS1P17812 591 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 VCLP18206 1134 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 MSH3P20585 1137 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 SLC7A1P30825 629 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 SPAM1P38567 509 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 DPP6P42658 865 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 CDKN1CP49918 316 aaPredicted RBP9.2□□□□□ -0.94
CBX1-203ENST00000402583 AQP4P55087 323 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 ERVK-8P63133 956 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 MS4A2Q01362 244 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 RHDQ02161 417 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 INPP5AQ14642 412 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 PCBP2Q15366 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
CBX1-203ENST00000402583 TGFBIQ15582 683 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 LRRC36Q1X8D7 754 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 TUSC1Q2TAM9 212 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 SFT2D3Q587I9 215 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 FAM117BQ6P1L5 589 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 CYHR1Q6ZMK1 362 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 RNF111Q6ZNA4 994 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 PRR23BQ6ZRT6 265 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 ARPINQ7Z6K5 226 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 SYVN1Q86TM6 617 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 SERPINA9Q86WD7 417 aa9.2□□□□□ -0.94
CBX1-203ENST00000402583 PHYKPLQ8IUZ5 450 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms