RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SERHLQ9NQF3 203 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SPHK2Q9NRA0 654 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 LEF1Q9UJU2 399 aaPredicted RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 BACE2Q9Y5Z0 518 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ATXN2Q99700 1313 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 PPP1R37O75864 691 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SYNGR4O95473 234 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 GJA1P17302 382 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 FOXK1P85037 733 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SIM2Q14190 667 aaPredicted RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 PIK3R6Q5UE93 754 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 MLIPQ5VWP3 458 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ITFG1Q8TB96 612 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 FNIP1Q8TF40 1166 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 HDAC7Q8WUI4 952 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 LRIG1Q96JA1 1093 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 TEFMQ96QE5 360 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 LMAN1LQ9HAT1 526 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 GDE1Q9NZC3 331 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 VWA7Q9Y334 891 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PCDHGB5Q9Y5G0 923 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SCN11AQ9UI33 1791 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 BTAF1O14981 1849 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 RIPK2O43353 540 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 CTSAP10619 480 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SLC6A2P23975 617 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 LMO2P25791 158 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ASPAP45381 313 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ST13P50502 369 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 PTSQ03393 145 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 RUNX3Q13761 415 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ECM1Q16610 540 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 GPR33Q49SQ1 333 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PAPD7Q5XG87 772 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 TTC33Q6PID6 262 aaPredicted RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 ATG14Q6ZNE5 492 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 RTL4Q6ZR62 310 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PIK3C3Q8NEB9 887 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 NDRG1Q92597 394 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 DMGDHQ9UI17 866 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 LYVE1Q9Y5Y7 322 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 LATS1O95835 1130 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 PIGRP01833 764 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 CD63P08962 238 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 CALB2P22676 271 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 FASP25445 335 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 CXCL12P48061 93 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 KHKP50053 298 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 NAE1Q13564 534 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 SPATA19Q7Z5L4 167 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 C12orf40Q86WS4 652 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 ZNF473Q8WTR7 871 aaKnown RBP7.88□□□□□ -1.15
USP47-203ENST00000399455 CEP295NLQ96MC4 621 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 GDAP2Q9NXN4 497 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 TAS2R14Q9NYV8 317 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 HEY2Q9UBP5 337 aa7.88□□□□□ -1.15
USP47-203ENST00000399455 C2orf74A8MZ97 194 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 GMFGO60234 142 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 GSRP00390 522 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TRBC1P01850 177 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ALPPP05187 535 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PRG2P13727 222 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 NTSR1P30989 418 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SLC1A5Q15758 541 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ARSHQ5FYA8 562 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 C16orf46Q6P387 395 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 C22orf39Q6P5X5 142 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TRPM8Q7Z2W7 1104 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 RANBP3LQ86VV4 465 aaPredicted RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 DEFB123Q8N688 67 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 OR2AP1Q8NGE2 309 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 KAT5Q92993 513 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TOX2Q96NM4 488 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ABCG8Q9H221 673 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ELL3Q9HB65 397 aaPredicted RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 ZDHHC3Q9NYG2 299 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ZNF490Q9ULM2 529 aaPredicted RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 IRGMA1A4Y4 181 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 KDELR3O43731 214 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 MFSD11O43934 449 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 RNGTTO60942 597 aaKnown RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 CYB5AP00167 134 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SERPINB1P30740 379 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CLCN7P51798 805 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ITIH4Q14624 930 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 GPR180Q86V85 440 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ADHFE1Q8IWW8 467 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PLA2G15Q8NCC3 412 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ZIM3Q96PE6 472 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 GMLQ99445 158 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 MIPEPQ99797 713 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CCSER2Q9H7U1 834 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 EQTNQ9NQ60 294 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 NHSL1Q5SYE7 1610 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CBSLP0DN79 551 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 NR2C1P13056 603 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CBSP35520 551 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 MAPKAPK3Q16644 382 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CLEC20AQ6ZU45 233 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms