RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 SFTPA2Q8IWL1 248 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 SYCE1Q8N0S2 351 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 ZNF567Q8N184 647 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 Q8N9G6 341 aaPredicted RBP11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 HNRNPLLQ8WVV9 542 aaKnown RBP11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 EID2BQ96D98 161 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 ATXN7L3BQ96GX2 97 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 ZNF578Q96N58 590 aaPredicted RBP11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 QKIQ96PU8 341 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 FCRL5Q96RD9 977 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 SPATA16Q9BXB7 569 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 LRRN3Q9H3W5 708 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 POLR1BQ9H9Y6 1135 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 TPSG1Q9NRR2 321 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 AMFRQ9UKV5 643 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 CNOT6Q9ULM6 557 aaKnown RBP11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 PLEKHM1Q9Y4G2 1056 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 ENTPD2Q9Y5L3 495 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 ST14Q9Y5Y6 855 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 RNF215Q9Y6U7 377 aa11.67□□□□□ -0.54
SMIM11A-201ENST00000399292 GRID2IPA4D2P6 1211 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 CASC3O15234 703 aaKnown RBP11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ZW10O43264 779 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 TLX3O43711 291 aaPredicted RBP11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ECEL1O95672 775 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 SLC4A1P02730 911 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 PYGMP11217 842 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 RBL1P28749 1068 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 RBMS1P29558 406 aaKnown RBP11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 PTPN7P35236 360 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ACTR1BP42025 376 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ACTR1AP61163 376 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 BIRC2Q13490 618 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 LRP8Q14114 963 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 NOMO1Q15155 1222 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 TBC1D25Q3MII6 688 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 PEX26Q7Z412 305 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 C17orf82Q86X59 251 aaPredicted RBP11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 CCNJLQ8IV13 435 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ARL14Q8N4G2 192 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 UBL4BQ8N7F7 174 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 LRRC57Q8N9N7 239 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 GPR26Q8NDV2 337 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ACTL9Q8TC94 416 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 OR2M4Q96R27 311 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ZSCAN5AQ9BUG6 496 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 TRABDQ9H4I3 376 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 RMI1Q9H9A7 625 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 VPS18Q9P253 973 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 RSPH14Q9UHP6 348 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 ZNF711Q9Y462 761 aa11.66□□□□□ -0.54
SMIM11A-201ENST00000399292 LOC400499M0QZD8 3231 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 A0A1W2PQM1 296 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 MACROD2A1Z1Q3 448 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 RHPN2P1A8MT19 583 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 FADS2P1A8MWK0 482 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 DNAJC6O75061 913 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 SLC25A14O95258 325 aaPredicted RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 PTMAP06454 111 aaKnown RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 DCDC1P59894 354 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 EIF3EP60228 445 aaKnown RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 ERVPABLB-1P60509 514 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 OTUD4Q01804 1114 aaKnown RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 MPP3Q13368 585 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 COL28A1Q2UY09 1125 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 C3orf38Q5JPI3 329 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 SIRPB2Q5JXA9 342 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 ALS2CLQ60I27 953 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 PDPK2PQ6A1A2 396 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 KDELC1Q6UW63 502 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 CHST15Q7LFX5 561 aaPredicted RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 SLC25A41Q8N5S1 370 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 TRAM1L1Q8N609 369 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 WDR36Q8NI36 951 aaKnown RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 ALG3Q92685 438 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 OXNAD1Q96HP4 312 aaPredicted RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 TMEM74Q96NL1 305 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 SLC46A1Q96NT5 459 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 HERPUD2Q9BSE4 406 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 DESI2Q9BSY9 194 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 STRADBQ9C0K7 418 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 C10orf88Q9H8K7 445 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 TRIM39Q9HCM9 518 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 NFKBIL1Q9UBC1 381 aaPredicted RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 TRIM10Q9UDY6 481 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 PCDHGA8Q9Y5G5 932 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 SPO11Q9Y5K1 396 aa11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 OAS3Q9Y6K5 1087 aaKnown RBP11.65□□□□□ -0.54
SMIM11A-201ENST00000399292 APC2O95996 2303 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 CCDC187A0A096LP49 1063 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 GOLGA6L9A6NEM1 432 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 MIF4GDA9UHW6 222 aaKnown RBP11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 D6RAR5 112 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 F5H423 210 aaPredicted RBP11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 TGFBR3LH3BV60 316 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 AURKAO14965 403 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 B4GAT1O43505 415 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 NUAK1O60285 661 aa11.64□□□□□ -0.55
SMIM11A-201ENST00000399292 ANXA9O76027 345 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms