RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNF548Q8NEK5 533 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPR150Q8NGU9 434 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SAP25Q8TEE9 199 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ULK4Q96C45 1275 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CFAP36Q96G28 342 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C9orf72Q96LT7 481 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 COPS8Q99627 209 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NAT9Q9BTE0 207 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FAM129AQ9BZQ8 928 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FOXP3Q9BZS1 431 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TMEM168Q9H0V1 697 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CARS2Q9HA77 564 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CYP4F12Q9HCS2 524 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CATSPERZQ9NTU4 200 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZDHHC3Q9NYG2 299 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SLC23A2Q9UGH3 650 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 APOBEC3BQ9UH17 382 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NFU1Q9UMS0 254 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PRSS21Q9Y6M0 314 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 V9GYY5 206 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZFC3H1O60293 1989 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DMXL1Q9Y485 3027 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 VEGFDO43915 354 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CDK14O94921 469 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ASMTLO95671 621 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TTC4O95801 387 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FAM153BP0C7A2 387 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNF883P0CG24 379 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ERVK-10P10266 1014 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SSTR1P30872 391 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GNPDA1P46926 289 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CCT8P50990 548 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C1orf61Q13536 156 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CUL1Q13616 776 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FRG1Q14331 258 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 HLTFQ14527 1009 aaKnown RBP eCLIP12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ITIH4Q14624 930 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LONRF1Q17RB8 773 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FAM153CQ494X1 144 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 AASDHQ4L235 1098 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNF658BQ4V348 819 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NEPROQ6NW34 567 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CRTC3Q6UUV7 619 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PACS1Q6VY07 963 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DET1Q7L5Y6 550 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TAS2R42Q7RTR8 314 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 RD3Q7Z3Z2 195 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 KCNMB4Q86W47 210 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GATAD2AQ86YP4 633 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CCNJLQ8IV13 435 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DENND6AQ8IWF6 608 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 IFT20Q8IY31 132 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 KIAA2013Q8IYS2 634 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CERS2Q96G23 380 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 OR2M4Q96R27 311 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FMO2Q99518 471 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SMYD2Q9NRG4 433 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C20orf96Q9NUD7 363 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GULP1Q9UBP9 304 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MOSPD1Q9UJG1 213 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PIKFYVEQ9Y2I7 2098 aa12.25□□□□□ -0.45
HLA-DQB1-203ENST00000399082 OR2AG2A6NM03 316 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C4orf47A7E2U8 309 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GRID2O43424 1007 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PCDHGA12O60330 932 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DFNA5O60443 496 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TNFP01375 233 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CD59P13987 128 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PAMP19021 973 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 OGNP20774 298 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 AK4P27144 223 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TNFRSF8P28908 595 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 AKT1P31749 480 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SLC1A2P43004 574 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MAGEA4P43358 317 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ARRB1P49407 418 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 HNRNPKP61978 463 aaKnown RBP eCLIP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 VSNL1P62760 191 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NAA30Q147X3 362 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PLA2G4EQ3MJ16 856 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FASTKD1Q53R41 847 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PRRT3Q5FWE3 981 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNF470Q6ECI4 717 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CERS6Q6ZMG9 384 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DBX2Q6ZNG2 339 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CAPN12Q6ZSI9 719 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CILP2Q8IUL8 1156 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 RELL1Q8IUW5 271 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SPNS2Q8IVW8 549 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SFTPA2Q8IWL1 248 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CNTN4Q8IWV2 1026 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CLDN19Q8N6F1 224 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 BEND7Q8N7W2 519 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GSDMBQ8TAX9 411 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LKAAEAR1Q8TD35 194 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPBAR1Q8TDU6 330 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms