RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RHPN2P1A8MT19 583 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PGRMC1O00264 195 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KMOO15229 486 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 B4GAT1O43505 415 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PRSS56P0CW18 603 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF7P17097 686 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 MC4RP32245 332 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 HADHAP40939 763 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TERF1P54274 439 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 OR1D5P58170 312 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 B4GALNT1Q00973 533 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 BIRC2Q13490 618 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SEPT7Q16181 437 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 RBM44Q6ZP01 1051 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 DET1Q7L5Y6 550 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 B3GNT8Q7Z7M8 397 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF761Q86XN6 746 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SFRP1Q8N474 314 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 BEND7Q8N7W2 519 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 KDF1Q8NAX2 398 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 MAGOHBQ96A72 148 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SGF29Q96ES7 293 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GFM1Q96RP9 751 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 LRRN3Q9H3W5 708 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NLE1Q9NVX2 485 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ATXN7L1Q9ULK2 861 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 COL27A1Q8IZC6 1860 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 MROH6A6NGR9 719 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 AGAP14A8MT82 685 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TAF4O00268 1085 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TCEA3O75764 348 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 F3P13726 295 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PNLIPP16233 465 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 RPL10P27635 214 aaKnown RBP13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 AKT1P31749 480 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 VPS41P49754 854 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ARSDP51689 593 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GNG11P61952 73 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GTF2H3Q13889 308 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 AMZ1Q400G9 498 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 IYDQ6PHW0 289 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TMEM220Q6QAJ8 160 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TMPRSS9Q7Z410 1059 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ACTRT1Q8TDG2 376 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ATXN7L3BQ96GX2 97 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CDKN2AIPNLQ96HQ2 116 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF778Q96MU6 729 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 FOXP3Q9BZS1 431 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CCDC86Q9H6F5 360 aaKnown RBP13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 RDH14Q9HBH5 336 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CASS4Q9NQ75 786 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SCHIP1Q9P0W5 487 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZMIZ1Q9ULJ6 1067 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ENTPD2Q9Y5L3 495 aa13.88□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF106Q9H2Y7 1883 aaKnown RBP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 A0A1W2PNU3 283 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TCRBV7S3A2A0A539 114 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 OR51F1A6NGY5 319 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PRR19A6NJB7 356 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 D6RAR5 112 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 MPOP05164 745 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 MSH3P20585 1137 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 COILP38432 576 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 DRG2P55039 364 aaKnown RBP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CCDC173Q0VFZ6 552 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZRANB3Q5FWF4 1079 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 FNBP1LQ5T0N5 605 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CCDC137Q6PK04 289 aaKnown RBP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 USP53Q70EK8 1073 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZNF438Q7Z4V0 828 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SNX20Q7Z614 316 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 WDR48Q8TAF3 677 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 STYXQ8WUJ0 223 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NAP1L3Q99457 506 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 C19orf43Q9BQ61 176 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TIMM29Q9BSF4 260 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZCCHC2Q9C0B9 1178 aaKnown RBP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NRSN2Q9GZP1 204 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SLC2A6Q9UGQ3 507 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 AK5Q9Y6K8 562 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SLC30A1Q9Y6M5 507 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 UNC13CQ8NB66 2214 aa13.87□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PMS2P1A4D2B8 440 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TMEM8BA6NDV4 472 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PDZK1P1A8MUH7 402 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 H7C0S8 307 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 AGRPO00253 132 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 POP7O75817 140 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GAS8O95995 478 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ITGALP20701 1170 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PBLDP30039 288 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 FASLGP48023 281 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CLCNKAP51800 687 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CRADDP78560 199 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 HHEXQ03014 270 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GPS1Q13098 491 aa13.86□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NR1D2Q14995 579 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms