RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ZNF678Q5SXM1 525 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 WSCD1Q658N2 575 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 THOC7Q6I9Y2 204 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 LCN8Q6JVE9 175 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 PRICKLE2Q7Z3G6 844 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 TBC1D21Q8IYX1 336 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 TMEM125Q96AQ2 219 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 KLHL5Q96PQ7 755 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SLX1AQ9BQ83 275 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 FEM1AQ9BSK4 669 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 MCMBPQ9BTE3 642 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ATP13A3Q9H7F0 1226 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 MPP6Q9NZW5 540 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 MARCH4Q9P2E8 410 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 RCOR3Q9P2K3 495 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 POLG2Q9UHN1 485 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 PDE10AQ9Y233 779 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SNX2O60749 519 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 JRKO75564 520 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SEC14L2O76054 403 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 FYNP06241 537 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 PRSS56P0CW18 603 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 IMPDH1P20839 514 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SERPINB1P30740 379 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 FMO3P31513 532 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 CTSOP43234 321 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 DGKQP52824 942 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SIM2Q14190 667 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 GRIN2CQ14957 1233 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ACAP2Q15057 778 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 PSMD5Q16401 504 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 PHKG1Q16816 387 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ARL13BQ3SXY8 428 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 LINC00523Q86TU6 105 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 OSTM1Q86WC4 334 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ZDHHC13Q8IUH4 622 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ITFG1Q8TB96 612 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 FRS2Q8WU20 508 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SNX27Q96L92 541 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 HSFY1Q96LI6 401 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 DACH2Q96NX9 599 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 OSMRQ99650 979 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 COLEC11Q9BWP8 271 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 CFHR5Q9BXR6 569 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 TUBB1Q9H4B7 451 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 RGS18Q9NS28 235 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SUN2Q9UH99 717 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 GSTA4O15217 222 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 GAS2O43903 313 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 TBC1D4O60343 1298 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 FTH1P02794 183 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 GPIP06744 558 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 FCGR1AP12314 374 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 CRHBPP24387 322 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ARSDP51689 593 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 OAZ1P54368 228 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ADARB1P78563 741 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 SELPLGQ14242 412 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ISCA2Q86U28 154 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 TTC39CQ8N584 583 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 RPL3LQ92901 407 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 NSMCE3Q96MG7 304 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 TPK1Q9H3S4 243 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 INTS10Q9NVR2 710 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ERAP1Q9NZ08 941 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 TMEM9Q9P0T7 183 aa9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 AAR2Q9Y312 384 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 OAS3Q9Y6K5 1087 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-202ENST00000398738 ZFC3H1O60293 1989 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 SHROOM3Q8TF72 1996 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 TBX1O43435 398 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DAB1O75553 588 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 C1RP00736 705 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 BMP4P12644 408 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 NPR3P17342 541 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DNAJB13P59910 316 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 CCNA1P78396 465 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 CD47Q08722 323 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 SELENBP1Q13228 472 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 CTU2Q2VPK5 515 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 PAN2Q504Q3 1202 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 TFAP2DQ7Z6R9 452 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DCP1BQ8IZD4 617 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 POC5Q8NA72 575 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 C2CD4AQ8NCU7 369 aaPredicted RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 ZNF555Q8NEP9 628 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 OSCP1Q8WVF1 389 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 NCLNQ969V3 563 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 CCDC126Q96EE4 140 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 DUS3LQ96G46 650 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 RHNO1Q9BSD3 238 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 THUMPD3Q9BV44 507 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 MROQ9BYG7 248 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 WDR6Q9NNW5 1121 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 NT5MQ9NPB1 228 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 HPS4Q9NQG7 708 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 NOX1Q9Y5S8 564 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 LINC00854A0A1B0GVQ3 168 aa9.79□□□□□ -0.84
PTCHD4-202ENST00000398738 C16orf96A6NNT2 1141 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms