RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SH3KBP1Q96B97 665 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 DNAJC1Q96KC8 554 aaKnown RBP14.08□□□□□ -0.16
HDDC2-202ENST00000398153 TTC1Q99614 292 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 COPS8Q99627 209 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 NRSN2Q9GZP1 204 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 STN1Q9H668 368 aaKnown RBP14.08□□□□□ -0.16
HDDC2-202ENST00000398153 BFARQ9NZS9 450 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 CRLS1Q9UJA2 301 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 NEU2Q9Y3R4 380 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 SPEGQ15772 3267 aa14.08□□□□□ -0.16
HDDC2-202ENST00000398153 PLXNB3Q9ULL4 1909 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 CEP295Q9C0D2 2601 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PRR19A6NJB7 356 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 RHPN2P1A8MT19 583 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 ZNF185O15231 689 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 MTX2O75431 263 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 GSTM1P09488 218 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 MLNP12872 115 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 IDSP22304 550 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 AKT1P31749 480 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 MC4RP32245 332 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PAFAH1B1P43034 410 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 GSTM4Q03013 218 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 GPS1Q13098 491 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 TARDBPQ13148 414 aaKnown RBP eCLIP14.07□□□□□ -0.163e-6■■□□□ 14.4
HDDC2-202ENST00000398153 BIRC2Q13490 618 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 CAMK2BQ13554 666 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 SEPT6Q14141 434 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 SPIDRQ14159 915 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 KHDC1Q4VXA5 237 aaKnown RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 ZNF648Q5T619 568 aaPredicted RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 TSTD2Q5T7W7 516 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 AGAP9Q5VTM2 703 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 LYPLAL1Q5VWZ2 237 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 UNQ6494/PRO21346Q6UXR6 183 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 RBM44Q6ZP01 1051 aaKnown RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 C11orf96Q7Z7L8 435 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PRUNE1Q86TP1 453 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 SLC9B2Q86UD5 537 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 AMZ2Q86W34 360 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 CREG2Q8IUH2 290 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 TRAPPC5Q8IUR0 188 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 BEND7Q8N7W2 519 aaPredicted RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 RASGEF1AQ8N9B8 481 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PPHLN1Q8NEY8 458 aaKnown RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 CCDC74AQ96AQ1 378 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 DCUN1D1Q96GG9 259 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 LINC00615Q96LM1 132 aaPredicted RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 TMEM121BQ9BXQ6 578 aaPredicted RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 ARFGAP3Q9NP61 516 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 SARS2Q9NP81 518 aaKnown RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 KLC4Q9NSK0 619 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 DKK4Q9UBT3 224 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 TBC1D29Q9UFV1 150 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PCYOX1Q9UHG3 505 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 TCAF1Q9Y4C2 921 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PLEKHM1Q9Y4G2 1056 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 PCYT1BQ9Y5K3 369 aaPredicted RBP14.07□□□□□ -0.16
HDDC2-202ENST00000398153 RNF215Q9Y6U7 377 aa14.07□□□□□ -0.16
HDDC2-202ENST00000398153 IGLV3-16A0A075B6K0 115 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 MAGEB16A2A368 324 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 A6NCN8 305 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 CCDC188H7C350 402 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 QSOX1O00391 747 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 XRCC1P18887 633 aaPredicted RBP14.06□□□□□ -0.16
HDDC2-202ENST00000398153 ACRV1P26436 265 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 PPARGP37231 505 aaPredicted RBP14.06□□□□□ -0.16
HDDC2-202ENST00000398153 GRIA1P42261 906 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 TMPRSS15P98073 1019 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 SQSTM1Q13501 440 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 KCNJ11Q14654 390 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 BCL7AQ4VC05 210 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 TMEM220Q6QAJ8 160 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 ABRAXAS1Q6UWZ7 409 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 CERS6Q6ZMG9 384 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 SYDE1Q6ZW31 735 aaPredicted RBP14.06□□□□□ -0.16
HDDC2-202ENST00000398153 SPRED1Q7Z699 444 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 CCNJLQ8IV13 435 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 MCUQ8NE86 351 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 OR13J1Q8NGT2 312 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 GFM1Q96RP9 751 aaKnown RBP14.06□□□□□ -0.16
HDDC2-202ENST00000398153 DPYSL5Q9BPU6 564 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 LRRN3Q9H3W5 708 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 VPS37BQ9H9H4 285 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 UCK1Q9HA47 277 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 MRM3Q9HC36 420 aaKnown RBP14.06□□□□□ -0.16
HDDC2-202ENST00000398153 ZDHHC3Q9NYG2 299 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 KCNK6Q9Y257 313 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 ASXL3Q9C0F0 2248 aa14.06□□□□□ -0.16
HDDC2-202ENST00000398153 RP1P56715 2156 aa14.05□□□□□ -0.16
HDDC2-202ENST00000398153 KNTC1P50748 2209 aa14.05□□□□□ -0.16
HDDC2-202ENST00000398153 C17orf113A0A1B0GUU1 675 aa14.05□□□□□ -0.16
HDDC2-202ENST00000398153 MGAT4DA6NG13 374 aa14.05□□□□□ -0.16
HDDC2-202ENST00000398153 F8W8V4 182 aa14.05□□□□□ -0.16
HDDC2-202ENST00000398153 POP7O75817 140 aaKnown RBP14.05□□□□□ -0.16
HDDC2-202ENST00000398153 AP2A2O94973 939 aa14.05□□□□□ -0.16
HDDC2-202ENST00000398153 PROS1P07225 676 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms