RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 PARP4Q9UKK3 1724 aaKnown RBP12.33□□□□□ -0.44
SOCS6-201ENST00000397942 TRAV19A0A0A6YYK7 116 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 AQP12BA6NM10 295 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 FAM72CH0Y354 149 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 PIRO00625 290 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 ERAL1O75616 437 aaKnown RBP12.33□□□□□ -0.44
SOCS6-201ENST00000397942 CDK9P50750 372 aaKnown RBP12.33□□□□□ -0.44
SOCS6-201ENST00000397942 MTTPP55157 894 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 DGKKQ5KSL6 1271 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 FAM72AQ5TYM5 149 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 FAM72DQ6L9T8 149 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 SERPINA13PQ6UXR4 307 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 FAM72BQ86X60 149 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 AQP12AQ8IXF9 295 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 CLDN19Q8N6F1 224 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 FEM1CQ96JP0 617 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
SOCS6-201ENST00000397942 C16orf70Q9BSU1 422 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
SOCS6-201ENST00000397942 SLC6A2P23975 617 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 MTHFRP42898 656 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 PGGT1BP53609 377 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 NOGQ13253 232 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 ARMC6Q6NXE6 501 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 TRIM40Q6P9F5 258 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 EPGNQ6UW88 154 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 RPS27LQ71UM5 84 aaKnown RBP12.33□□□□□ -0.44
SOCS6-201ENST00000397942 DSG4Q86SJ6 1040 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 HIPK1Q86Z02 1210 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 PNPT1Q8TCS8 783 aaKnown RBP12.33□□□□□ -0.44
SOCS6-201ENST00000397942 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 QRFPRQ96P65 431 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 CYP2S1Q96SQ9 504 aa12.33□□□□□ -0.44
SOCS6-201ENST00000397942 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 STBD1O95210 358 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 IL1BP01584 269 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 FBXW4P57775 412 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 CDC42P60953 191 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 CYS1Q717R9 158 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 ENDOVQ8N8Q3 282 aaKnown RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 MOCOSQ96EN8 888 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 OAZ3Q9UMX2 235 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 IGKV6D-21A0A0A0MT36 114 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 MTPNP58546 118 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 SGCGQ13326 291 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 POC5Q8NA72 575 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 KIFC1Q9BW19 673 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 KCTD3Q9Y597 815 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 SYN3O14994 580 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 XYLBO75191 536 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 ANGPTL1O95841 491 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 PRKCGP05129 697 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 CLTBP09497 229 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 GPR1P46091 355 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 CDH4P55283 916 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 HERVK_113P63132 956 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 CYP4F2P78329 520 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 TGM3Q08188 693 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 CYP4F3Q08477 520 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 HERC3Q15034 1050 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 PSMA8Q8TAA3 256 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 COL26A1Q96A83 441 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 PAWRQ96IZ0 340 aaKnown RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 ERVK-6Q9BXR3 956 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 BRD9Q9H8M2 597 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 TRMT13Q9NUP7 481 aaKnown RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 DNAJC11Q9NVH1 559 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 MYH3P11055 1940 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 ZNF487B1APH4 448 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 PRR23D1E9PI22 279 aaPredicted RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 SLC9A3R1O14745 358 aaPredicted RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 PRR23D2P0DMB1 279 aaPredicted RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 HMGCS1Q01581 520 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 SKIV2LQ15477 1246 aaKnown RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 CRTC3Q6UUV7 619 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 SERPINA9Q86WD7 417 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 TDRD1Q9BXT4 1180 aaKnown RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 TPK1Q9H3S4 243 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 FAM83DQ9H4H8 585 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 SAMD4AQ9UPU9 718 aaKnown RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
SOCS6-201ENST00000397942 ARL5AQ9Y689 179 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 AHCTF1Q8WYP5 2266 aa12.32□□□□□ -0.44
SOCS6-201ENST00000397942 MYL12BO14950 172 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 CLDN9O95484 217 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 SNAI1O95863 264 aaPredicted RBP12.31□□□□□ -0.44
SOCS6-201ENST00000397942 UGT1A6P19224 532 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 UGT1A1P22309 533 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 UGT1A4P22310 534 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 UGT1A3P35503 534 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 UGT1A5P35504 534 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 CCR10P46092 362 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 AP1S1P61966 158 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 CHIT1Q13231 466 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 ASRGL1Q7L266 308 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 SLC13A3Q8WWT9 602 aa12.31□□□□□ -0.44
SOCS6-201ENST00000397942 TFB2MQ9H5Q4 396 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms