RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 STYXL1Q9Y6J8 313 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 TYW5A2RUC4 315 aaKnown RBP11.41□□□□□ -0.58
PUM3-202ENST00000397885 UPK1AO00322 258 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 AXIN1O15169 862 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 DLX3O60479 287 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 USP12O75317 370 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 OR7A10O76100 309 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 CD4P01730 458 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 GJB1P08034 283 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 STMN1P16949 149 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 JUNDP17535 347 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 ALOX12P18054 663 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 POLD2P49005 469 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 ACOT2P49753 483 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 CXCR4P61073 352 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 CCNA1P78396 465 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 CLCA4Q14CN2 919 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 CTU2Q2VPK5 515 aaKnown RBP11.41□□□□□ -0.58
PUM3-202ENST00000397885 OTUD3Q5T2D3 398 aaPredicted RBP11.41□□□□□ -0.58
PUM3-202ENST00000397885 PIK3R6Q5UE93 754 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
PUM3-202ENST00000397885 LAIR2Q6ISS4 152 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 TAS1R3Q7RTX0 852 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 FUNDC1Q8IVP5 155 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 EMC1Q8N766 993 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 TSPEARQ8WU66 669 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 NCLNQ969V3 563 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 TBCBQ99426 244 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 REXO4Q9GZR2 422 aaKnown RBP11.41□□□□□ -0.58
PUM3-202ENST00000397885 CCDC90BQ9GZT6 254 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 NUAK2Q9H093 628 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 RNF208Q9H0X6 261 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 DCSTAMPQ9H295 470 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 NSMCE4AQ9NXX6 385 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 CCDC59Q9P031 241 aaKnown RBP11.41□□□□□ -0.58
PUM3-202ENST00000397885 GMPR2Q9P2T1 348 aaKnown RBP11.41□□□□□ -0.58
PUM3-202ENST00000397885 GJD2Q9UKL4 321 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.41□□□□□ -0.58
PUM3-202ENST00000397885 TPRKBQ9Y3C4 175 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 HCN4Q9Y3Q4 1203 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 PEX16Q9Y5Y5 336 aa11.41□□□□□ -0.58
PUM3-202ENST00000397885 A0A0A0MRY4 1105 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 KRT87PA6NCN2 255 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 EFCAB9A8MZ26 197 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 LEUTXA8MZ59 168 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 EPN2O95208 641 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 ASS1P00966 412 aaKnown RBP11.4□□□□□ -0.58
PUM3-202ENST00000397885 GPX3P22352 226 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 EEFSECP57772 596 aaKnown RBP11.4□□□□□ -0.58
PUM3-202ENST00000397885 LSM3P62310 102 aaKnown RBP11.4□□□□□ -0.58
PUM3-202ENST00000397885 POU6F2P78424 691 aaPredicted RBP11.4□□□□□ -0.58
PUM3-202ENST00000397885 PXDC1Q5TGL8 231 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 ZNF691Q5VV52 312 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 TIGD3Q6B0B8 471 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 ZDHHC13Q8IUH4 622 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 PCDH19Q8TAB3 1148 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 SH3KBP1Q96B97 665 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 HSFY1Q96LI6 401 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 SPATA13Q96N96 652 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 GPR22Q99680 433 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 MSTO1Q9BUK6 570 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 DUSP21Q9H596 190 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 TXNRD2Q9NNW7 524 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 TIGARQ9NQ88 270 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 PDLIM7Q9NR12 457 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 STOML2Q9UJZ1 356 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 TRAPPC4Q9Y296 219 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 AP3M1Q9Y2T2 418 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 PLXNB2O15031 1838 aa11.4□□□□□ -0.58
PUM3-202ENST00000397885 HACD1B0YJ81 288 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 TMEM233B4DJY2 109 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 FXYD1O00168 92 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 PRLP01236 227 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 PIGRP01833 764 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 INHAP05111 366 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 HOXB1P14653 301 aaPredicted RBP11.4□□□□□ -0.59
PUM3-202ENST00000397885 GTF2E2P29084 291 aaKnown RBP11.4□□□□□ -0.59
PUM3-202ENST00000397885 IL12RB1P42701 662 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 SESN2P58004 480 aaPredicted RBP11.4□□□□□ -0.59
PUM3-202ENST00000397885 PIGFQ07326 219 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 RIPPLY1Q0D2K3 151 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 TNK1Q13470 666 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 GPAT3Q53EU6 434 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 HEATR6Q6AI08 1181 aaKnown RBP11.4□□□□□ -0.59
PUM3-202ENST00000397885 SWSAP1Q6NVH7 229 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 PRR23BQ6ZRT6 265 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 SPATC1Q76KD6 591 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 TMEM135Q86UB9 458 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 ZC3HC1Q86WB0 502 aaKnown RBP11.4□□□□□ -0.59
PUM3-202ENST00000397885 TCTE3Q8IZS6 198 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 SVOPLQ8N434 492 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 FSTL5Q8N475 847 aaPredicted RBP11.4□□□□□ -0.59
PUM3-202ENST00000397885 ANKRD53Q8N9V6 530 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 LRRC20Q8TCA0 184 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 SOCS4Q8WXH5 440 aa11.4□□□□□ -0.59
PUM3-202ENST00000397885 LRRC58Q96CX6 371 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms