RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 IQCGQ9H095 443 aaKnown RBP20.95■□□□□ 0.94
CPNE1-204ENST00000397443 KDM4CQ9H3R0 1056 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 SPATA6Q9NWH7 488 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-204ENST00000397443 CA5BQ9Y2D0 317 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 MED16Q9Y2X0 877 aa20.95■□□□□ 0.94
CPNE1-204ENST00000397443 TYROBPO43914 113 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 FSBPO95073 299 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 MPOP05164 745 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 CD6P30203 668 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 CCNFP41002 786 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 ZKSCAN8Q15776 578 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 LDLRAP1Q5SW96 308 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 NEK5Q6P3R8 708 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 PLD6Q8N2A8 252 aaKnown RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 TCP10LQ8TDR4 215 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 LGR4Q9BXB1 951 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 TAS2R13Q9NYV9 303 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 SLC17A7Q9P2U7 560 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 TSR3Q9UJK0 312 aaKnown RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 PCDHB1Q9Y5F3 818 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 OAS3Q9Y6K5 1087 aaKnown RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 IGLV3-16A0A075B6K0 115 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 CFAP99D6REC4 459 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 VPS26AO75436 327 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 RALBP11234 206 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 ATP1B2P14415 290 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 CRABP2P29373 138 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 POLD2P49005 469 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 ADARP55265 1226 aaKnown RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 IRX4P78413 519 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 TSSK4Q6SA08 328 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 DEFB119Q8N690 84 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 BEND7Q8N7W2 519 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 ACMSDQ8TDX5 336 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 KCTD4Q8WVF5 259 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 ALKBH8Q96BT7 664 aaKnown RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 SLC30A3Q99726 388 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 PAIP2Q9BPZ3 127 aaKnown RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 C1QTNF7Q9BXJ2 289 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 OR2AG1Q9H205 316 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 WSB2Q9NYS7 404 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 DLGAP2Q9P1A6 1054 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 FAM8A1Q9UBU6 413 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 SMG5Q9UPR3 1016 aaKnown RBP20.94■□□□□ 0.94
CPNE1-204ENST00000397443 TMEM98Q9Y2Y6 226 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 ACOT9Q9Y305 439 aa20.94■□□□□ 0.94
CPNE1-204ENST00000397443 ZNF217O75362 1048 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 ASMTLO95671 621 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 RPS3P23396 243 aaKnown RBP eCLIP20.93■□□□□ 0.943e-8■■■□□ 18.5
CPNE1-204ENST00000397443 CCT5P48643 541 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 CLDN2P57739 230 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 TMEM115Q12893 351 aaPredicted RBP20.93■□□□□ 0.94
CPNE1-204ENST00000397443 MAP7D1Q3KQU3 841 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 TTC19Q6DKK2 380 aaPredicted RBP20.93■□□□□ 0.94
CPNE1-204ENST00000397443 C16orf46Q6P387 395 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 TMEM207Q6UWW9 146 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 FUBP1Q96AE4 644 aaKnown RBP20.93■□□□□ 0.94
CPNE1-204ENST00000397443 CENPTQ96BT3 561 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 HIC2Q96JB3 615 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 KCTD5Q9NXV2 234 aa20.93■□□□□ 0.94
CPNE1-204ENST00000397443 IGHV1OR15-9A0A0B4J2B8 117 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 IGLV3-19P01714 112 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CHN1P15882 459 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 OXTRP30559 389 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 IGFALSP35858 605 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 GLRBP48167 497 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CCR3P51677 355 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CSHL1Q14406 222 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 AGERQ15109 404 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 SEPT7Q16181 437 aaKnown RBP20.92■□□□□ 0.94
CPNE1-204ENST00000397443 PAQR3Q6TCH7 311 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 TBC1D1Q86TI0 1168 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-204ENST00000397443 TRIM69Q86WT6 500 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 RASGEF1AQ8N9B8 481 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 ANKRD49Q8WVL7 239 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 SNX19Q92543 992 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 FAM111AQ96PZ2 611 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 WDR26Q9H7D7 661 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 NKIRAS1Q9NYS0 192 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 TRMT6Q9UJA5 497 aaKnown RBP20.92■□□□□ 0.94
CPNE1-204ENST00000397443 H0Y8X5 98 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 K7ESF4 209 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 PRPF4O43172 522 aaKnown RBP eCLIP20.92■□□□□ 0.942e-8■□□□□ 11.3
CPNE1-204ENST00000397443 CDK14O94921 469 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CCDC166P0CW27 439 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 AOC1P19801 751 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CTSCP53634 463 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CDK3Q00526 305 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 DMWDQ09019 674 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 ADAMTSL4Q6UY14 1074 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 MACC1Q6ZN28 852 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 NLRP8Q86W28 1048 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CAMKK1Q8N5S9 505 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 GIMAP7Q8NHV1 300 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 KCNJ9Q92806 393 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 CABS1Q96KC9 395 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 EBF2Q9HAK2 575 aa20.92■□□□□ 0.94
CPNE1-204ENST00000397443 TMEM221A6NGB7 291 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 M0R296 226 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 PYGLP06737 847 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms