RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 BOCQ9BWV1 1114 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 P2RY12Q9H244 342 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 CAB39LQ9H9S4 337 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 SENP1Q9P0U3 644 aa16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 CNOT6Q9ULM6 557 aaKnown RBP16.77■□□□□ 0.27
TSPAN4-205ENST00000397406 TPP1O14773 563 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC30A4O14863 429 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 MPLP40238 635 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 B4GALNT1Q00973 533 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 FOXK2Q01167 660 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 GPRC6AQ5T6X5 926 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 PMS2CLQ68D20 193 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 TRIM69Q86WT6 500 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC41A1Q8IVJ1 513 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 RBFAQ8N0V3 343 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 GPATCH11Q8N954 259 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 TP53I13Q8NBR0 393 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 PLA2G15Q8NCC3 412 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 DDHD1Q8NEL9 900 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 ASB12Q8WXK4 309 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 KLK6Q92876 244 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 GLYATL1Q969I3 302 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 ELMO2Q96JJ3 720 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC17A9Q9BYT1 436 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 SNX15Q9NRS6 342 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC39A10Q9ULF5 831 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 CYP8B1Q9UNU6 501 aa16.76■□□□□ 0.27
TSPAN4-205ENST00000397406 LAMA1P25391 3075 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 CEP192Q8TEP8 1941 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 NCOR2Q9Y618 2525 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 FAM47DPA6NHR8 397 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 LRRC72A6NJI9 287 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 PRMT5O14744 637 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 TM4SF5O14894 197 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 SEMA4FO95754 770 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 PAK4O96013 591 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 ZNF7P17097 686 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 RPS3P23396 243 aaKnown RBP eCLIP16.75■□□□□ 0.276e-8■■■■■ 37.4
TSPAN4-205ENST00000397406 OAS2P29728 719 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 OXTRP30559 389 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 FMO4P31512 558 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 CCNFP41002 786 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 GPR1P46091 355 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 SERPINB8P50452 374 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 TIAL1Q01085 375 aaKnown RBP eCLIP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 POU4F1Q01851 419 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 USP10Q14694 798 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 ZKSCAN8Q15776 578 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 CTSL3PQ5NE16 218 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 HECTD2Q5U5R9 776 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 RAET1GQ6H3X3 334 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 FAM45BPQ6NSW5 357 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 CMC1Q7Z7K0 106 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 C4orf33Q8N1A6 199 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 FAM45AQ8TCE6 357 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 KLF6Q99612 283 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 COPS8Q99627 209 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 OLFM1Q99784 485 aa16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 WSB2Q9NYS7 404 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 CDV3Q9UKY7 258 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-205ENST00000397406 IGHV1OR15-9A0A0B4J2B8 117 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 GOLGA8RI6L899 631 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 RAD51BO15315 384 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 ZNF217O75362 1048 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 ESR1P03372 595 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 PYGLP06737 847 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 PYGBP11216 843 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 PKMP14618 531 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 KRT4P19013 534 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 FDXRP22570 491 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 MAT2AP31153 395 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 CDKN2DP55273 166 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 TAS2R39P59534 338 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 SLC18A2Q05940 514 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 SGCGQ13326 291 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 LRRC14Q15048 493 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 KHDC1Q4VXA5 237 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 PNCKQ6P2M8 343 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 ADAMTSL4Q6UY14 1074 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 MTERF4Q7Z6M4 381 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 CEP97Q8IW35 865 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 NETO1Q8TDF5 533 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 ACMSDQ8TDX5 336 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 TOE1Q96GM8 510 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 RTKNQ9BST9 563 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 CLPBQ9H078 707 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 MBNL1Q9NR56 388 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 MED16Q9Y2X0 877 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 VWA7Q9Y334 891 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 PCDHB1Q9Y5F3 818 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 PCDHGA5Q9Y5G8 931 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 COMMD10Q9Y6G5 202 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 PRSS21Q9Y6M0 314 aa16.74■□□□□ 0.27
TSPAN4-205ENST00000397406 ABCA7Q8IZY2 2146 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 PATE3B3GLJ2 98 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 INPP4BO15327 924 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 LATO43561 262 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 PCCBP05166 539 aa16.73■□□□□ 0.27
TSPAN4-205ENST00000397406 BRAFP15056 766 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms